RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 GOLM1Q8NBJ4 401 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TMEM178AQ8NBL3 297 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TMCO6Q96DC7 493 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ANKRD27Q96NW4 1050 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SLC39A3Q9BRY0 314 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 G6PC3Q9BUM1 346 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HES7Q9BYE0 225 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 LUZP4Q9P127 313 aa13.32□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CACNA1GO43497 2377 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HMGN4O00479 90 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 IL33O95760 270 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 AK1P00568 194 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 IGKV1D-16P01601 117 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ETFAP13804 333 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CPA2P48052 419 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MVDP53602 400 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MTPNP58546 118 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DSTNP60981 165 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HPCAP84074 193 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KLRB1Q12918 225 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FADDQ13158 208 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GPAT3Q53EU6 434 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PRAMEF20Q5VT98 475 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FAM91A1Q658Y4 838 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SLC6A19Q695T7 634 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 DESI1Q6ICB0 168 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 LSM14AQ8ND56 463 aaKnown RBP13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PNPLA2Q96AD5 504 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ROPN1LQ96C74 230 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TRIM8Q9BZR9 551 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SACM1LQ9NTJ5 587 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ARL8BQ9NVJ2 186 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CNIH4Q9P003 139 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TAGLN3Q9UI15 199 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CHCHD2Q9Y6H1 151 aaPredicted RBP13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CNTRLQ7Z7A1 2325 aa13.31□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TMEM247A6NEH6 219 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 G3V3Y1 287 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NME2P1O60361 137 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CCL3P10147 92 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NR2F1P10589 423 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CYP4B1P13584 511 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NME2P22392 152 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MAGEA8P43361 318 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GPR85P60893 370 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ARHGAP11BQ3KRB8 267 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 COLEC12Q5KU26 742 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NANOGP8Q6NSW7 305 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GALNTL5Q7Z4T8 443 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FAM110BQ8TC76 370 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SPPL2AQ8TCT8 520 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PAQR8Q8TEZ7 354 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SLC39A7Q92504 469 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HGDQ93099 445 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SCMH1Q96GD3 660 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NODALQ96S42 347 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SDF2Q99470 211 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SH3GL1Q99961 368 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CPPED1Q9BRF8 314 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 IKZF5Q9H5V7 419 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 METTL7AQ9H8H3 244 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NANOGQ9H9S0 305 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FBXO34Q9NWN3 711 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 THUMPD1Q9NXG2 353 aaKnown RBP13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KLRF1Q9NZS2 232 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KLF13Q9Y2Y9 288 aaPredicted RBP13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ATMQ13315 3056 aa13.3□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ICOSLGO75144 302 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 UTS2O95399 124 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 ESRRAP11474 423 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GPX2P18283 190 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 MXRA7P84157 204 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SELPLGQ14242 412 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KRT72Q14CN4 511 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 PLEKHN1Q494U1 663 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HEPHL1Q6MZM0 1159 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FAM98AQ8NCA5 519 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CHDHQ8NE62 594 aaPredicted RBP13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SECISBP2Q96T21 854 aaKnown RBP13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 P2RX2Q9UBL9 471 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 LIPT1Q9Y234 373 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GMEB1Q9Y692 573 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KLRC4-KLRK1H3BQV0 150 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FXYD1O00168 92 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 SLC28A2O43868 658 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 STX11O75558 287 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CBX6O95503 412 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 BCHEP06276 602 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 NUDT7P0C024 238 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 HPGDP15428 266 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CNR1P21554 472 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 EVI2BP34910 448 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CASP3P42574 277 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 KCNJ2P63252 427 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 GPR68Q15743 365 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 CYP51A1Q16850 503 aa13.29□□□□□ -0.28
TNFRSF1A-216ENST00000543995 FLYWCH1Q4VC44 716 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms