RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 SLITRK4Q8IW52 837 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 PTPMT1Q8WUK0 201 aaPredicted RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 TSLPQ969D9 159 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 NIPSNAP1Q9BPW8 284 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 OR10A5Q9H207 317 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 CACYBPQ9HB71 228 aaKnown RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 MKKSQ9NPJ1 570 aaPredicted RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 PAPOLBQ9NRJ5 636 aaKnown RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 KLHL28Q9NXS3 571 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 KCNE5Q9UJ90 142 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 NDRG4Q9ULP0 352 aaKnown RBP18.42■□□□□ 0.54
COPS7A-218ENST00000543939 TMCC3Q9ULS5 477 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 DTX4Q9Y2E6 619 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 POFUT2Q9Y2G5 429 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 PCDHGA5Q9Y5G8 931 aa18.42■□□□□ 0.54
COPS7A-218ENST00000543939 A0A1W2PRQ8 180 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 C17orf105B2RV13 164 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 KHNYNO15037 678 aaKnown RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 UGT2B17O75795 530 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 OXSR1O95747 527 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 CLPTM1O96005 669 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 DBIP07108 87 aaKnown RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 IL7RP16871 459 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 TNNI3P19429 210 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 EPHA2P29317 976 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 RYKP34925 604 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 TPD52P55327 224 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 EEF1A1P68104 462 aaKnown RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 RAPSNQ13702 412 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 DGCR6Q14129 220 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 SEC23BQ15437 767 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 MAPK14Q16539 360 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 MINDY4Q4G0A6 757 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 VWA2Q5GFL6 755 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 FGD3Q5JSP0 725 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 DCST1Q5T197 706 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 MFSD4BQ5TF39 518 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 ZC3H14Q6PJT7 736 aaKnown RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 NPSR1Q6W5P4 371 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 DBX2Q6ZNG2 339 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 PRR23CQ6ZRP0 262 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 COX15Q7KZN9 410 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 C7orf57Q8NEG2 295 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 OR7G1Q8NGA0 311 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 C16orf52Q8NHV5 167 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 PITX2Q99697 317 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 FNDC11Q9BVV2 318 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 SLC22A11Q9NSA0 550 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 RARRES3Q9UL19 164 aa18.41■□□□□ 0.54
COPS7A-218ENST00000543939 COL5A1P20908 1838 aaPredicted RBP18.41■□□□□ 0.54
COPS7A-218ENST00000543939 FAAHO00519 579 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 FRS3O43559 492 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TPST2O60704 377 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 ELK4P28324 431 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TRHRP34981 398 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-218ENST00000543939 CD47Q08722 323 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 EIPR1Q53HC9 387 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 ZAR1Q86SH2 424 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 AQP11Q8NBQ7 271 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 FBLIM1Q8WUP2 373 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 NR4A3Q92570 626 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 FKBP10Q96AY3 582 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 ING2Q9H160 280 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 PNO1Q9NRX1 252 aaKnown RBP18.4■□□□□ 0.54
COPS7A-218ENST00000543939 MAN2C1Q9NTJ4 1040 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 PCDHGB2Q9Y5G2 931 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TCRBV16S1A1N1A0A5B0 115 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TTC36A6NLP5 189 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 CLDN24A6NM45 220 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 D6RAR5 112 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TIAF1O95411 115 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TFAP2AP05549 437 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 FOXD4Q12950 439 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-218ENST00000543939 CTU2Q2VPK5 515 aaKnown RBP18.4■□□□□ 0.54
COPS7A-218ENST00000543939 LIN52Q52LA3 116 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 TMEM151BQ8IW70 566 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 SLC7A13Q8TCU3 470 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 SENP5Q96HI0 755 aaPredicted RBP18.4■□□□□ 0.54
COPS7A-218ENST00000543939 SLC7A5P2Q9GIP4 190 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 ZNF556Q9HAH1 456 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 PRODH2Q9UF12 536 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 GMPPBQ9Y5P6 360 aa18.4■□□□□ 0.54
COPS7A-218ENST00000543939 NPIPA5A0A0B4J1W7 369 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 SH3PXD2BA1X283 911 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 NPIPA7E9PJI5 369 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 AGRPO00253 132 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 PEX12O00623 359 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 GASTP01350 101 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 IGKV1D-16P01601 117 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 NPIPA8P0DM63 369 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 CT45A8P0DMV1 189 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 CT45A9P0DMV2 189 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 NID1P14543 1247 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 ATP6V1B1P15313 513 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 RORAP35398 523 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 GRK6P43250 576 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 RGS8P57771 180 aaPredicted RBP18.39■□□□□ 0.53
COPS7A-218ENST00000543939 RPP38P78345 283 aaKnown RBP18.39■□□□□ 0.53
COPS7A-218ENST00000543939 CT45A2Q5DJT8 189 aa18.39■□□□□ 0.53
COPS7A-218ENST00000543939 PLA2G2CQ5R387 149 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms