RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ZMPSTE24O75844 475 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 OAZ2O95190 189 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 GUCA1CO95843 209 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 GSRP00390 522 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PIGRP01833 764 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 APOC2P02655 101 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 OPN1LWP04000 364 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 HEXAP06865 529 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SERPINF2P08697 491 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ACAA1P09110 424 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CLUP10909 449 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ANXA3P12429 323 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ANXA8P13928 327 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 NCF1P14598 390 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CD36P16671 472 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 EFNA1P20827 205 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ATP5A1P25705 553 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ITGB8P26012 769 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ELK4P28324 431 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PDHA2P29803 388 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CCKARP32238 428 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 GPX4P36969 197 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 TGFBR2P37173 567 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CSKP41240 450 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CD86P42081 329 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 MAGEA3P43357 314 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 TGM4P49221 684 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 RGS19P49795 217 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 STARD6P59095 220 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 TAS2R40P59535 323 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 RAB5BP61020 215 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 NCS1P62166 190 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SLC35A2P78381 396 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 TFAMQ00059 246 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF33AQ06730 810 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 FOXO1Q12778 655 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF155Q12901 538 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ILKQ13418 452 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PICALMQ13492 652 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CUL2Q13617 745 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SNTB1Q13884 538 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 KEAP1Q14145 624 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 TFDP2Q14188 446 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 MXD4Q14582 209 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CHRNA6Q15825 494 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 STXBP2Q15833 593 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 WSCD2Q2TBF2 565 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PTPN20Q4JDL3 420 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PAN3Q58A45 887 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 XKR9Q5GH70 373 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 LCN1P1Q5VSP4 162 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ANXA8L1Q5VT79 327 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF691Q5VV52 312 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CES4AQ5XG92 561 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 REP15Q6BDI9 236 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CES5AQ6NT32 575 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 METAP1DQ6UB28 335 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 UQCC3Q6UW78 93 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 DLEU7Q6UYE1 221 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 RASSF6Q6ZTQ3 369 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 FJX1Q86VR8 437 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ANKRD46Q86W74 232 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PSTKQ8IV42 348 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 NAXDQ8IW45 347 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SLC35F3Q8IY50 421 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 OR8H2Q8N162 312 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SPATA6LQ8N4H0 392 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 MINDY1Q8N5J2 469 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 AVL9Q8NBF6 648 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 UXS1Q8NBZ7 420 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ZNF540Q8NDQ6 660 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PPHLN1Q8NEY8 458 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 OR6X1Q8NH79 312 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 C9orf43Q8TAL5 461 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 NANPQ8TBE9 248 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ST7LQ8TDW4 575 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SEMA4DQ92854 862 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 EXOSC8Q96B26 276 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 LRRC46Q96FV0 321 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 PDLIM5Q96HC4 596 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 NARS2Q96I59 477 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 LINC00052Q96N35 136 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 LRFN5Q96NI6 719 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 ERMAPQ96PL5 475 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CCNL2Q96S94 520 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 KLF6Q99612 283 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SDHCQ99643 169 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 RBM4BQ9BQ04 359 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 CBWD1Q9BRT8 395 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 WDR83Q9BRX9 315 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 MARVELD1Q9BSK0 173 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 COPS4Q9BT78 406 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 NAT9Q9BTE0 207 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 KATNAL1Q9BW62 490 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 RBM4Q9BWF3 364 aaKnown RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SRRQ9GZT4 340 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 SDCBP2Q9H190 292 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 OSGEPL1Q9H4B0 414 aa5.47□□□□□ -1.53
XRCC4-206ENST00000542685 FAM124BQ9H5Z6 455 aaPredicted RBP5.47□□□□□ -1.53
XRCC4-206ENST00000542685 DDX31Q9H8H2 851 aaKnown RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms