RNA–Protein interactions for RNA: ENST00000542340.1

CACNA2D4-215, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 3

Gene CACNA2D4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-215ENST00000542340 PGS1Q32NB8 556 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 TMEM211Q6ICI0 200 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 MFSD12Q6NUT3 480 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 SZRD1Q7Z422 152 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 WDSUB1Q8N9V3 476 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 NEUROD4Q9HD90 331 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 PNPLA3Q9NST1 481 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 ZCCHC3Q9NUD5 404 aaKnown RBP18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 SPRR3Q9UBC9 169 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 MARCOQ9UEW3 520 aaPredicted RBP18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 PCDHGB3Q9Y5G1 929 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 WIF1Q9Y5W5 379 aa18.33■□□□□ 0.52
CACNA2D4-215ENST00000542340 GXYLT2A0PJZ3 443 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 FIGNL2A6NMB9 653 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 HMGB1P1B2RPK0 211 aaPredicted RBP18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 ANKRD28O15084 1053 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 FADS1O60427 444 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 C6orf47O95873 294 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 KITP10721 976 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 EVI2BP34910 448 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 TRPC1P48995 793 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 CCT3P49368 545 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 PRIM2P49643 509 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 GAS1P54826 345 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 ART3Q13508 389 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 EXOSC6Q5RKV6 272 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 WLSQ5T9L3 541 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 SPATA19Q7Z5L4 167 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 PLCZ1Q86YW0 608 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 SLC16A11Q8NCK7 471 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 OR8J2Q8NGG1 315 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 OR5M9Q8NGP3 310 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 PIWIL2Q8TC59 973 aaKnown RBP18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 SLC9A6Q92581 669 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 TESCQ96BS2 214 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 CXorf36Q9H7Y0 433 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 ABCG2Q9UNQ0 655 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 SNX8Q9Y5X2 465 aa18.32■□□□□ 0.52
CACNA2D4-215ENST00000542340 NCKAP5O14513 1909 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 PCNX1Q96RV3 2341 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 CFLARO15519 480 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 HMGN2P05204 90 aaKnown RBP18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 ALOX5P09917 674 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 ACP2P11117 423 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 TOMM20Q15388 145 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 OR56A1Q8NGH5 318 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 SFXN5Q8TD22 340 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 PIK3R3Q92569 461 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 MOAP1Q96BY2 351 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 DTNBP1Q96EV8 351 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 RMND5BQ96G75 393 aaPredicted RBP18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 C16orf58Q96GQ5 468 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 WDR55Q9H6Y2 383 aaPredicted RBP18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 SERHLQ9NQF3 203 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 AIG1Q9NVV5 245 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 FAM120CQ9NX05 1096 aaKnown RBP18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 GIN1Q9NXP7 522 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 TNFRSF10DQ9UBN6 386 aa18.31■□□□□ 0.52
CACNA2D4-215ENST00000542340 RNASET2O00584 256 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 WDR1O75083 606 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 SOX30O94993 753 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 IGKV1D-16P01601 117 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 HOXD4P09016 255 aaPredicted RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 ALDOCP09972 364 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 ACVR2AP27037 513 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 EPHA3P29320 983 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 KIR3DL1P43629 444 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 CLNS1AP54105 237 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 WNT3P56703 355 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 HBA1P69905 142 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 DUSP5Q16690 384 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 DPY19L1Q2PZI1 675 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 SPDYE7PQ495Y7 208 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 NHSL2Q5HYW2 709 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 OR4F3Q6IEY1 312 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 ZNF585AQ6P3V2 769 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 NCCRP1Q6ZVX7 275 aaPredicted RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 FAM83FQ8NEG4 500 aaPredicted RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 VPS37AQ8NEZ2 397 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 FAM110BQ8TC76 370 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 MAELQ96JY0 434 aaKnown RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 STACQ99469 402 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 SDHAF3Q9NRP4 125 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 DUSP22Q9NRW4 184 aa18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 KLF2Q9Y5W3 355 aaPredicted RBP18.3■□□□□ 0.52
CACNA2D4-215ENST00000542340 NCOA6Q14686 2063 aaPredicted RBP18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 C15orf38-AP3S2A0A0A6YYH1 394 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 GOLGA8QA0A0J9YX86 632 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 GOLGA8OA6NCC3 632 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 GOLGA8NF8WBI6 632 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 GABRA1P14867 456 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 RFX3P48380 749 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 CLK3P49761 638 aaKnown RBP18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 CRYZQ08257 329 aaKnown RBP18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 LASP1Q14847 261 aaKnown RBP18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 EIPR1Q53HC9 387 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 WIPI1Q5MNZ9 446 aaPredicted RBP18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 ANXA8L1Q5VT79 327 aa18.29■□□□□ 0.52
CACNA2D4-215ENST00000542340 VASNQ6EMK4 673 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms