RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 EFR3AQ14156 821 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 ANKRD26P1Q6NSI1 321 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 APOOLQ6UXV4 268 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 ZYG11AQ6WRX3 759 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 MARCH3Q86UD3 253 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 SLC22A9Q8IVM8 553 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 ERP27Q96DN0 273 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 LRRC46Q96FV0 321 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 TM9SF2Q99805 663 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 SMR3AQ99954 134 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 KLHDC3Q9BQ90 382 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 PCNX3Q9H6A9 2034 aa17.96■□□□□ 0.47
DDX11-220ENST00000542244 GMFGO60234 142 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 ABCB7O75027 752 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 ZNF763Q0D2J5 394 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 FBXW10Q5XX13 1052 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 GRAMD2AQ8IUY3 354 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 OR4K17Q8NGC6 315 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 MBD6Q96DN6 1003 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 STARD4Q96DR4 205 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 AMDHD1Q96NU7 426 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 ALPK1Q96QP1 1244 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 NPAS1Q99742 590 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 GIMAP4Q9NUV9 329 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 PSMC3IPQ9P2W1 217 aaPredicted RBP17.95■□□□□ 0.46
DDX11-220ENST00000542244 C19orf53Q9UNZ5 99 aaPredicted RBP17.95■□□□□ 0.46
DDX11-220ENST00000542244 ZNF337Q9Y3M9 751 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 OR10H1Q9Y4A9 318 aa17.95■□□□□ 0.46
DDX11-220ENST00000542244 SH3D21A4FU49 640 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 RAF1P04049 648 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 HK1P19367 917 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 CHMP24386 653 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 MPIP34949 423 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 GCKP35557 465 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 KRT20P35900 424 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 CPOXP36551 454 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 CPA2P48052 419 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 CLDN20P56880 219 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 DEFB113Q30KQ7 82 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 ZNF385BQ569K4 471 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 CLEC6AQ6EIG7 209 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 AAGABQ6PD74 315 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 ZNF474Q6S9Z5 364 aaPredicted RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 C22orf34Q6ZV56 151 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 ZNF551Q7Z340 670 aaPredicted RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 BTLAQ7Z6A9 289 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 GALNT10Q86SR1 603 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 CHDHQ8NE62 594 aaPredicted RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 ACMSDQ8TDX5 336 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 GFM2Q969S9 779 aaKnown RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 ZNF845Q96IR2 970 aaPredicted RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 YIPF4Q9BSR8 244 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 OPN3Q9H1Y3 402 aaPredicted RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 MYNNQ9NPC7 610 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 TAS2R9Q9NYW1 312 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 SENP1Q9P0U3 644 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 PPP4R1LQ9P1A2 415 aa17.94■□□□□ 0.46
DDX11-220ENST00000542244 MRPS18CQ9Y3D5 142 aaKnown RBP17.94■□□□□ 0.46
DDX11-220ENST00000542244 GSTA1P08263 222 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 CD53P19397 219 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 CCKARP32238 428 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 KIR2DL2P43627 348 aaPredicted RBP17.93■□□□□ 0.46
DDX11-220ENST00000542244 RFX3P48380 749 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 SIRPAP78324 504 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 KIAA0040Q15053 153 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 NOXRED1Q6NXP6 359 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 FRMD7Q6ZUT3 714 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 TRIM46Q7Z4K8 759 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 EXOC3L1Q86VI1 746 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 LCA5Q86VQ0 697 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 IFT20Q8IY31 132 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 OR2L13Q8N349 312 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 OR2T11Q8NH01 316 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 DUSP19Q8WTR2 217 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 PIK3R3Q92569 461 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 CIDECQ96AQ7 238 aaPredicted RBP17.93■□□□□ 0.46
DDX11-220ENST00000542244 ELP4Q96EB1 424 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 DACH2Q96NX9 599 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 C6orf203Q9P0P8 240 aaPredicted RBP17.93■□□□□ 0.46
DDX11-220ENST00000542244 PACSIN3Q9UKS6 424 aa17.93■□□□□ 0.46
DDX11-220ENST00000542244 A0A087WV62 115 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 OR2M5A3KFT3 312 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 SEC14L5O43304 696 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 PLIN3O60664 434 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 SMNDC1O75940 238 aaKnown RBP eCLIP17.92■□□□□ 0.46
DDX11-220ENST00000542244 MYL2P10916 166 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 DSCR4P56555 118 aaPredicted RBP17.92■□□□□ 0.46
DDX11-220ENST00000542244 PPP2R2AP63151 447 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 KEAP1Q14145 624 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 ZAR1Q86SH2 424 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 SAMD14Q8IZD0 417 aaPredicted RBP17.92■□□□□ 0.46
DDX11-220ENST00000542244 ZFP3Q96NJ6 502 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 WFIKKN1Q96NZ8 548 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 PIGQQ9BRB3 760 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 KLHL28Q9NXS3 571 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 TAS2R7Q9NYW3 318 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 DCDC2Q9UHG0 476 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 TESMINQ9Y4I5 508 aa17.92■□□□□ 0.46
DDX11-220ENST00000542244 FLNAP21333 2647 aaKnown RBP17.91■□□□□ 0.46
DDX11-220ENST00000542244 IL33O95760 270 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms