RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 IRAK3Q9Y616 596 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 FABP7O15540 132 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 EEF1E1O43324 174 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ORC5O43913 435 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 CHRM4P08173 479 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SRPRAP08240 638 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 P2RY2P41231 377 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 PPP3R1P63098 170 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ELOAQ14241 798 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 FCN2Q15485 313 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SLC36A4Q6YBV0 504 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 QSOX2Q6ZRP7 698 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 SLC38A6Q8IZM9 456 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 CCDC120Q96HB5 630 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 ATF6BQ99941 703 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 PPIL3Q9H2H8 161 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 DDX31Q9H8H2 851 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 MAN2C1Q9NTJ4 1040 aa14.39□□□□□ -0.11
CNOT9-208ENST00000542068 TESQ9UGI8 421 aaKnown RBP14.39□□□□□ -0.11
CNOT9-208ENST00000542068 MRPL3P09001 348 aaKnown RBP14.38□□□□□ -0.11
CNOT9-208ENST00000542068 ACP2P11117 423 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 ELK1P19419 428 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 SLC1A3P43003 542 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 AGFG1P52594 562 aaKnown RBP14.38□□□□□ -0.11
CNOT9-208ENST00000542068 RPS7P62081 194 aaKnown RBP14.38□□□□□ -0.11
CNOT9-208ENST00000542068 FCRLBQ6BAA4 426 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 TMEM107Q6UX40 140 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 LRRTM4Q86VH4 590 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D19Q8N5T2 526 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 UBE2E3Q969T4 207 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 MAP6Q96JE9 813 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 SLC38A2Q96QD8 506 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 SGPP1Q9BX95 441 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 A4GALTQ9NPC4 353 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 MBNL1Q9NR56 388 aaKnown RBP14.38□□□□□ -0.11
CNOT9-208ENST00000542068 ZSCAN32Q9NX65 697 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 NKIRAS2Q9NYR9 191 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 H2AFY2Q9P0M6 372 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-208ENST00000542068 LOC105369274A0A096LPK9 316 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 C1QTNF3-AMACRE9PGA6 284 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 PRODHO43272 600 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 TBX6O95947 436 aaPredicted RBP14.38□□□□□ -0.11
CNOT9-208ENST00000542068 AHRP35869 848 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 SMIM11AP58511 58 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 TMEM31Q5JXX7 168 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 ARL9Q6T311 187 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 ADGRD2Q7Z7M1 963 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 OR4N4Q8N0Y3 316 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 SAMD12Q8N8I0 201 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 DPH7Q9BTV6 452 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 GLIPR2Q9H4G4 154 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 STMN3Q9NZ72 180 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 AP1M2Q9Y6Q5 423 aa14.38□□□□□ -0.11
CNOT9-208ENST00000542068 EDDM13A0A1B0GTR0 161 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 BTN3A3O00478 584 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 LCMT2O60294 686 aaKnown RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 PIP5K1CO60331 668 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 HMGN2P05204 90 aaKnown RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SSTR2P30874 369 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SGCGQ13326 291 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 MAB21L1Q13394 359 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 ANKRD54Q6NXT1 300 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 VITQ6UXI7 678 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 NKAIN4Q8IVV8 208 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 DCUN1D3Q8IWE4 304 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TMEM163Q8TC26 289 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 FGF13Q92913 245 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 CHFRQ96EP1 664 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 ZFP3Q96NJ6 502 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SF3B6Q9Y3B4 125 aaKnown RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 MYO15AQ9UKN7 3530 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 AKAP8O43823 692 aaKnown RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TOXO94900 526 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 NFATC1O95644 943 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TRIM23P36406 574 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 CCR8P51685 355 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 OR10A3P58181 314 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 RRAS2P62070 204 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 ABATP80404 500 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SYT9Q86SS6 491 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 RASSF5Q8WWW0 418 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 COQ10AQ96MF6 247 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 ABCG5Q9H222 651 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 PPP1R3EQ9H7J1 279 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 IL23AQ9NPF7 189 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3DA0A087WVF3 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3IA0A087WXS9 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3EA0A087X179 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3KA0A087X1G2 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3FA6NER0 549 aaPredicted RBP14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3LB9A6J9 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 PGRMC2O15173 223 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 NDUFS4O43181 175 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 REM1O75628 298 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 EPPINO95925 133 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 TBC1D3HP0C7X1 549 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 BSGP35613 385 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 EVX1P49640 407 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 SLC3A1Q07837 685 aa14.37□□□□□ -0.11
CNOT9-208ENST00000542068 ZNF311Q5JNZ3 666 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms