RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 LIPT1Q9Y234 373 aa17.24■□□□□ 0.35
VPS33A-205ENST00000541169 NUP214P35658 2090 aaPredicted RBP17.24■□□□□ 0.35
VPS33A-205ENST00000541169 UGT2B11O75310 529 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 KCNK2O95069 426 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 ZNF24P17028 368 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 ATP6V1C1P21283 382 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 GYS2P54840 703 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 ALDH6A1Q02252 535 aaKnown RBP17.23■□□□□ 0.35
VPS33A-205ENST00000541169 TLE1Q04724 770 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 STX5Q13190 355 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 AP1ARQ63HQ0 302 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 ATCAYQ86WG3 371 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 DPP10Q8N608 796 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 ZNF527Q8NB42 609 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 NR4A3Q92570 626 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 C16orf58Q96GQ5 468 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 TMEM41AQ96HV5 264 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 ZNF597Q96LX8 424 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 OR7D2Q96RA2 312 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 INPP5KQ9BT40 448 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 KLRF1Q9NZS2 232 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 RALYQ9UKM9 306 aaKnown RBP17.23■□□□□ 0.35
VPS33A-205ENST00000541169 CAPN7Q9Y6W3 813 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.23■□□□□ 0.35
VPS33A-205ENST00000541169 KALRNO60229 2985 aa17.23■□□□□ 0.35
VPS33A-205ENST00000541169 PRAMEF25A6NGN4 478 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 EDN3P14138 238 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 FADDQ13158 208 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 GNA13Q14344 377 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 ZNF324BQ6AW86 544 aaPredicted RBP17.22■□□□□ 0.35
VPS33A-205ENST00000541169 ANGPTL8Q6UXH0 198 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 GALNT11Q8NCW6 608 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 CHDHQ8NE62 594 aaPredicted RBP17.22■□□□□ 0.35
VPS33A-205ENST00000541169 OR4N2Q8NGD1 307 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 ZFP90Q8TF47 636 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 RNF138Q8WVD3 245 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 CDS1Q92903 461 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 TAAR6Q96RI8 345 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 YIPF4Q9BSR8 244 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 OSBPL11Q9BXB4 747 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 HES7Q9BYE0 225 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 FAM107BQ9H098 131 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 TPT1P8Q9HAU6 139 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 ZFP64Q9NPA5 681 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 UBQLN4Q9NRR5 601 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 ADAM21Q9UKJ8 722 aa17.22■□□□□ 0.35
VPS33A-205ENST00000541169 TMEM247A6NEH6 219 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 TRIM3O75382 744 aaPredicted RBP17.21■□□□□ 0.35
VPS33A-205ENST00000541169 STX11O75558 287 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 HPGDP15428 266 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 CAPN3P20807 821 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 EVI2BP34910 448 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 CDKN2CP42773 168 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 MASP1P48740 699 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 ST13P50502 369 aaKnown RBP17.21■□□□□ 0.35
VPS33A-205ENST00000541169 MLLT10P55197 1068 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 PLGLB1Q02325 96 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 KLF10Q13118 480 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 ARHGAP11BQ3KRB8 267 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 DCST2Q5T1A1 773 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 C16orf62Q7Z3J2 963 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 WDR53Q7Z5U6 358 aaPredicted RBP17.21■□□□□ 0.35
VPS33A-205ENST00000541169 PIGWQ7Z7B1 504 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 MISPQ8IVT2 679 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 PIK3R3Q92569 461 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 EFHD2Q96C19 240 aaPredicted RBP17.21■□□□□ 0.35
VPS33A-205ENST00000541169 NTNG2Q96CW9 530 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 SLX1AQ9BQ83 275 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 PAIP1Q9H074 479 aaKnown RBP17.21■□□□□ 0.35
VPS33A-205ENST00000541169 OR51I1Q9H343 314 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 DEPPQ9NTK1 212 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 ASF1BQ9NVP2 202 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 ARL2BPQ9Y2Y0 163 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 PCDHB14Q9Y5E9 798 aa17.21■□□□□ 0.35
VPS33A-205ENST00000541169 EVPLLA8MZ36 301 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 TFECO14948 347 aaPredicted RBP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 SHOX2O60902 331 aaPredicted RBP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 ICOSLGO75144 302 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 NME6O75414 186 aaPredicted RBP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 GLSO94925 669 aaPredicted RBP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 UTS2O95399 124 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 FAM107AO95990 144 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 GSNP06396 782 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 CYP4B1P13584 511 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 TBXA2RP21731 343 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 PTPN6P29350 595 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 GPR85P60893 370 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 HPCAP84074 193 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 GKAP1Q5VSY0 366 aaPredicted RBP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 PRAMEF20Q5VT98 475 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 HEPHL1Q6MZM0 1159 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 SLC2A7Q6PXP3 512 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 RNF130Q86XS8 419 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 ANKS4BQ8N8V4 417 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 PCYOX1LQ8NBM8 494 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 OR52N2Q8NGI0 321 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 RP9Q8TA86 221 aaKnown RBP17.2■□□□□ 0.34
VPS33A-205ENST00000541169 MIB2Q96AX9 1013 aa17.2■□□□□ 0.34
VPS33A-205ENST00000541169 TTTY12Q9BZ98 90 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms