RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 NEFHP12036 1026 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CPN1P15169 458 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 PRPH2P23942 346 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 GRK2P25098 689 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CTSSP25774 331 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 DPP4P27487 766 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 SRD5A2P31213 254 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CEACAM8P31997 349 aaPredicted RBP8.19□□□□□ -1.1
LMO3-222ENST00000540445 EVI2BP34910 448 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 PSMD4P55036 377 aaKnown RBP8.19□□□□□ -1.1
LMO3-222ENST00000540445 DLX5P56178 289 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 RPL38P63173 70 aaKnown RBP8.19□□□□□ -1.1
LMO3-222ENST00000540445 STX5Q13190 355 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 RFTN2Q52LD8 501 aaPredicted RBP8.19□□□□□ -1.1
LMO3-222ENST00000540445 ARL13AQ5H913 290 aaPredicted RBP8.19□□□□□ -1.1
LMO3-222ENST00000540445 Q6ZSR9 355 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 ZZZ3Q8IYH5 903 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 OR2L13Q8N349 312 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 NAXEQ8NCW5 288 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 OR2T11Q8NH01 316 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CEP70Q8NHQ1 597 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CLHC1Q8NHS4 586 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 ZFP28Q8NHY6 868 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 ZPLD1Q8TCW7 415 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 TCP10LQ8TDR4 215 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 GPR151Q8TDV0 419 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CIDECQ96AQ7 238 aaPredicted RBP8.19□□□□□ -1.1
LMO3-222ENST00000540445 SFXN2Q96NB2 322 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 MECRQ9BV79 373 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 DSN1Q9H410 356 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 TUBB1Q9H4B7 451 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 REEP4Q9H6H4 257 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 C3orf14Q9HBI5 128 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 EQTNQ9NQ60 294 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 MED11Q9P086 117 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 CCL27Q9Y4X3 112 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 DNAJC15Q9Y5T4 150 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 HEATR5AQ86XA9 2040 aa8.19□□□□□ -1.1
LMO3-222ENST00000540445 AKAP6Q13023 2319 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 MBD3L4A6NDZ8 208 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 MBD3L3A6NE82 208 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 MBD3L5A6NJ08 208 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 TMEM114B3SHH9 223 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 TMEM233B4DJY2 109 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 EEF1E1-BLOC1S5C9J1V9 151 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 LSM1O15116 133 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 EEF1E1O43324 174 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 GMFGO60234 142 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 ZIC3O60481 467 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 PEX11AO75192 247 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 KCNH1O95259 989 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 SLU7O95391 586 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 TMIGD3P0DMS9 266 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 PRPS2P11908 318 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 DDX5P17844 614 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 SDC1P18827 310 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 HK1P19367 917 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 CHMP24386 653 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 OPRM1P35372 400 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 PEX19P40855 299 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 ASCL1P50553 236 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 ZNF136P52737 540 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 DSCR4P56555 118 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 VPS26BQ4G0F5 336 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 FBXW10Q5XX13 1052 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 KANK2Q63ZY3 851 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 EMBQ6PCB8 327 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 ZCCHC23Q6ZST2 131 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 P4HA3Q7Z4N8 544 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 R3HCC1LQ7Z5L2 792 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 MARCH3Q86UD3 253 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 CDH24Q86UP0 819 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 UBQLNLQ8IYU4 475 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 RELL2Q8NC24 303 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 NUP43Q8NFH3 380 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 MBD3L2Q8NHZ7 208 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 PPP1R14CQ8TAE6 165 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 DUSP19Q8WTR2 217 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 TWIST2Q8WVJ9 160 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 PIK3R3Q92569 461 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 SLC9A6Q92581 669 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 RNASE6Q93091 150 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 ZBED6CLQ96FA7 236 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 CHMP6Q96FZ7 201 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 TM9SF2Q99805 663 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 CCT7Q99832 543 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 TUBA1CQ9BQE3 449 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 POLDIP3Q9BY77 421 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 TBL1XR1Q9BZK7 514 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 OR2B2Q9GZK3 357 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 PTGES2Q9H7Z7 377 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.18□□□□□ -1.1
LMO3-222ENST00000540445 FOXD3Q9UJU5 478 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 TMED5Q9Y3A6 229 aa8.18□□□□□ -1.1
LMO3-222ENST00000540445 MRPS18CQ9Y3D5 142 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 V9GYY5 206 aaPredicted RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 PRRC2AP48634 2157 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 ANKHD1Q8IWZ3 2542 aaKnown RBP8.18□□□□□ -1.1
LMO3-222ENST00000540445 VPS13CQ709C8 3753 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms