RNA–Protein interactions for RNA: ENST00000540216.5

CCDC130-202, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 995 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-202ENST00000540216 SPDYE7PQ495Y7 208 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 EXOSC6Q5RKV6 272 aaKnown RBP12.24□□□□□ -0.45
CCDC130-202ENST00000540216 ANXA8L1Q5VT79 327 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 DESI1Q6ICB0 168 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 WDR53Q7Z5U6 358 aaPredicted RBP12.24□□□□□ -0.45
CCDC130-202ENST00000540216 VPS37AQ8NEZ2 397 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 NEIL3Q8TAT5 605 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 ACTRT2Q8TDY3 377 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 CCDC120Q96HB5 630 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 STACQ99469 402 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 EXO5Q9H790 373 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 HHATLQ9HCP6 504 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 GALNT9Q9HCQ5 603 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 DUSP22Q9NRW4 184 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 INTS9Q9NV88 658 aaKnown RBP12.24□□□□□ -0.45
CCDC130-202ENST00000540216 FAM120CQ9NX05 1096 aaKnown RBP12.24□□□□□ -0.45
CCDC130-202ENST00000540216 PCDHGB4Q9UN71 923 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 PCDHGB3Q9Y5G1 929 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 LIPGQ9Y5X9 500 aa12.24□□□□□ -0.45
CCDC130-202ENST00000540216 MYO7BQ6PIF6 2116 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 FIGNL2A6NMB9 653 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 E9PBE3 544 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 GNB5O14775 395 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ZG16O60844 167 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 CBR3O75828 277 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 SASH3O75995 380 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 TGDSO95455 350 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ALDOCP09972 364 aaKnown RBP12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ACP2P11117 423 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 IDO1P14902 403 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 AGAP20933 346 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 CLK3P49761 638 aaKnown RBP12.23□□□□□ -0.45
CCDC130-202ENST00000540216 SMSP52788 366 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 LRRC74AQ0VAA2 488 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 OR4F3Q6IEY1 312 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ZNF808Q8N4W9 903 aaPredicted RBP12.23□□□□□ -0.45
CCDC130-202ENST00000540216 COX18Q8N8Q8 333 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 SLC16A11Q8NCK7 471 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 SLC9A6Q92581 669 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 RMND5BQ96G75 393 aaPredicted RBP12.23□□□□□ -0.45
CCDC130-202ENST00000540216 GNRHR2Q96P88 292 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 PHF12Q96QT6 1004 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 DMRTA2Q96SC8 542 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ACTRT3Q9BYD9 372 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 SLC6A15Q9H2J7 730 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 WDR55Q9H6Y2 383 aaPredicted RBP12.23□□□□□ -0.45
CCDC130-202ENST00000540216 CXorf36Q9H7Y0 433 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 SDHAF3Q9NRP4 125 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ACAD8Q9UKU7 415 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 USH1CQ9Y6N9 552 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 ICE1Q9Y2F5 2266 aa12.23□□□□□ -0.45
CCDC130-202ENST00000540216 GOLGA8QA0A0J9YX86 632 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 PRSS51A0A1B0GVH4 220 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GXYLT2A0PJZ3 443 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GOLGA8OA6NCC3 632 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 NPIPA2E9PIF3 369 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GOLGA8NF8WBI6 632 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 NPIPA3F8WFD2 350 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 ZNF195O14628 629 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 FADS1O60427 444 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 TRAPPC6AO75865 159 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 HMGN2P05204 90 aaKnown RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 NGFRP08138 427 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 HOXD4P09016 255 aaPredicted RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GP1BBP13224 206 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 S100A3P33764 101 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GCKP35557 465 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GAS1P54826 345 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 WNT3P56703 355 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 HBA1P69905 142 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 TP53BP2Q13625 1128 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 LASP1Q14847 261 aaKnown RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 DUSP5Q16690 384 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 FAM174BQ3ZCQ3 159 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 WLSQ5T9L3 541 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 NXNQ6DKJ4 435 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 TMEM211Q6ICI0 200 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 CDC73Q6P1J9 531 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 XKRXQ6PP77 449 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 MAMDC2Q7Z304 686 aaPredicted RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 MAVSQ7Z434 540 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 PLCZ1Q86YW0 608 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 WDSUB1Q8N9V3 476 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GLB1L3Q8NCI6 653 aaPredicted RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 FAM110BQ8TC76 370 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 NUDT8Q8WV74 236 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 ITLN2Q8WWU7 325 aaPredicted RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 PIK3R3Q92569 461 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 JADE3Q92613 823 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 ZBTB18Q99592 522 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 G6PC3Q9BUM1 346 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 BTBD2Q9BX70 525 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 PIGUQ9H490 435 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GPATCH2Q9NW75 528 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 PLEKHB1Q9UF11 243 aaPredicted RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 FAF1Q9UNN5 650 aaPredicted RBP12.22□□□□□ -0.45
CCDC130-202ENST00000540216 GPR45Q9Y5Y3 372 aa12.22□□□□□ -0.45
CCDC130-202ENST00000540216 ADAM10O14672 748 aa12.21□□□□□ -0.45
CCDC130-202ENST00000540216 ZNHIT1O43257 154 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms