RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RANGRFQ9HD47 186 aaPredicted RBP12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ATP13A2Q9NQ11 1180 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ASB4Q9Y574 426 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 CXorf51AA0A1B0GTR3 108 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 REM1O75628 298 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ALPPP05187 535 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 GYPBP06028 91 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF765Q7L2R6 523 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 PRSS41Q7RTY9 318 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF784Q8NCA9 323 aaPredicted RBP12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ADAMTS15Q8TE58 950 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 SAMD8Q96LT4 415 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 PRRC1Q96M27 445 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 SECISBP2Q96T21 854 aaKnown RBP12.8□□□□□ -0.36
BNIP3-202ENST00000540159 DPH1Q9BZG8 443 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 ISG20L2Q9H9L3 353 aaKnown RBP12.8□□□□□ -0.36
BNIP3-202ENST00000540159 STARD5Q9NSY2 213 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 GIMAP4Q9NUV9 329 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 PLEKHB1Q9UF11 243 aaPredicted RBP12.8□□□□□ -0.36
BNIP3-202ENST00000540159 PRKAG2Q9UGJ0 569 aa12.8□□□□□ -0.36
BNIP3-202ENST00000540159 KIF26AQ9ULI4 1882 aaPredicted RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 MAGEB4O15481 346 aaPredicted RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 PVRP15151 417 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 RPS7P62081 194 aaKnown RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 MLLT11Q13015 90 aaPredicted RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 TMEM240Q5SV17 173 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 ADAMTSL4Q6UY14 1074 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 TRIM69Q86WT6 500 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 MARCH9Q86YJ5 346 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 OR7G2Q8NG99 324 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 KCTD7Q96MP8 289 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 MCHR1Q99705 422 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 SRRQ9GZT4 340 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 CRISPLD2Q9H0B8 497 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 TBC1D29Q9UFV1 150 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 SLC7A7Q9UM01 511 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 MEIOCA2RUB1 952 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 SMLR1H3BR10 107 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 EFCAB14O75071 495 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 THY1P04216 161 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 CSF3P09919 207 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 LIMS3P0CW19 117 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 LIMS4P0CW20 117 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 CSNK2A2P19784 350 aaPredicted RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 IL18Q14116 193 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 TRMT12Q53H54 448 aaKnown RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 FIGNL1Q6PIW4 674 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 MTSS1LQ765P7 747 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 RAB43Q86YS6 212 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 RAB42Q8N4Z0 105 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 CYB561A3Q8NBI2 242 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 RNF31Q96EP0 1072 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 SLC35A4Q96G79 324 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 POLDIP3Q9BY77 421 aaKnown RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 OR51V1Q9H2C8 321 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 ACSS1Q9NUB1 689 aaPredicted RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 NDRG2Q9UN36 371 aaKnown RBP12.79□□□□□ -0.36
BNIP3-202ENST00000540159 AP1M2Q9Y6Q5 423 aa12.79□□□□□ -0.36
BNIP3-202ENST00000540159 A8MVJ9 347 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 UBXN7O94888 489 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 CEACAM5P06731 702 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PSKH1P11801 424 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PIPP12273 146 aaPredicted RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 GDI1P31150 447 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 DMPKQ09013 629 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF542PQ5EBM4 170 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PLBD1Q6P4A8 553 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 CPOQ8IVL8 374 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 OR6F1Q8NGZ6 308 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 HCAR2Q8TDS4 363 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 SPRYD4Q8WW59 207 aaPredicted RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 RASSF5Q8WWW0 418 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 LCN9Q8WX39 176 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 FUZQ9BT04 418 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 TRIM45Q9H8W5 580 aaPredicted RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PHPT1Q9NRX4 125 aaPredicted RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PAQR5Q9NXK6 330 aaPredicted RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 ZNF780BQ9Y6R6 833 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 FRYLO94915 3013 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 LTBP2Q14767 1821 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 LRRC72A6NJI9 287 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PRKNO60260 465 aaPredicted RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 CLEC3AO75596 197 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 CLUP10909 449 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 SMIM11AP58511 58 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PPP2CBP62714 309 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PPP2CAP67775 309 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 RPA4Q13156 261 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 RUNX3Q13761 415 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 ZFP69Q49AA0 526 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 C1orf94Q6P1W5 598 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 FAM26EQ8N5C1 309 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 PFN4Q8NHR9 129 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 ELP4Q96EB1 424 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 ACAD8Q9UKU7 415 aa12.78□□□□□ -0.36
BNIP3-202ENST00000540159 DIMT1Q9UNQ2 313 aaKnown RBP12.78□□□□□ -0.36
BNIP3-202ENST00000540159 ARRDC5A6NEK1 342 aa12.77□□□□□ -0.36
BNIP3-202ENST00000540159 OR2W5A6NFC9 320 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms