RNA–Protein interactions for RNA: ENST00000539631.1

TSPAN9-207, Transcript of tetraspanin 9, humanhuman

TSL 3

Gene TSPAN9, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-207ENST00000539631 RPP38P78345 283 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 TLE1Q04724 770 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 EFR3AQ14156 821 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 TNFAIP8L2Q6P589 184 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 FAM180AQ6UWF9 173 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 ANGPTL8Q6UXH0 198 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 PIGWQ7Z7B1 504 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 ZAR1Q86SH2 424 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 RETREG3Q86VR2 466 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 RNF130Q86XS8 419 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 PNPT1Q8TCS8 783 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 MIPOL1Q8TD10 442 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 TMCO6Q96DC7 493 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 AURKBQ96GD4 344 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 SECISBP2Q96T21 854 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 FAM173AQ9BQD7 235 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 BTBD2Q9BX70 525 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 ANGPTL4Q9BY76 406 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 TUBA8Q9NY65 449 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 ARMCX1Q9P291 453 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 LEF1Q9UJU2 399 aaPredicted RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 MRTO4Q9UKD2 239 aaKnown RBP11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 ADAM21Q9UKJ8 722 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 NDUFAF1Q9Y375 327 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 PCDHB14Q9Y5E9 798 aa11.66□□□□□ -0.54
TSPAN9-207ENST00000539631 ANKRD33BA6NCL7 494 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 C2orf72A6NCS6 295 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 PRAMEF25A6NGN4 478 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 CCDC22O60826 627 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 SHOX2O60902 331 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 ICOSLGO75144 302 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 KRT75O95678 551 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 OR12D1P0DN82 309 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 ADSLP30566 484 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 KHKP50053 298 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 PSMD4P55036 377 aaKnown RBP11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 KCNJ2P63252 427 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 RNFT1Q5M7Z0 435 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 TBCELQ5QJ74 424 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 COX20Q5RI15 118 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 DCST2Q5T1A1 773 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 LRIF1Q5T3J3 769 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 TMEM81Q6P7N7 255 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 MTDHQ86UE4 582 aaKnown RBP11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 MSRB3Q8IXL7 192 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 ZFP62Q8NB50 900 aaPredicted RBP11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 DNAJB8Q8NHS0 232 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 TSPEARQ8WU66 669 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 RAB8BQ92930 207 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 NTNG2Q96CW9 530 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 CCT8L2Q96SF2 557 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 DOHHQ9BU89 302 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 CCDC106Q9BWC9 280 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 OSBPL11Q9BXB4 747 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 METTL7AQ9H8H3 244 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 TPT1P8Q9HAU6 139 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 GALNT9Q9HCQ5 603 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 MRGBPQ9NV56 204 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 SLC25A37Q9NYZ2 338 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 CAPN7Q9Y6W3 813 aa11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.65□□□□□ -0.54
TSPAN9-207ENST00000539631 DUXAA6NLW8 204 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 FBP2O00757 339 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 ANGPT2O15123 496 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 HS6ST1O60243 411 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 FADS1O60427 444 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 WISP2O76076 250 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 SOX30O94993 753 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 UNC5CO95185 931 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 UTS2O95399 124 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 CRYABP02511 175 aaKnown RBP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 MST1P26927 711 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 MVDP53602 400 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 ALDH6A1Q02252 535 aaKnown RBP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 PLGLB1Q02325 96 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 FOXO1Q12778 655 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 GRAMD1BQ3KR37 738 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 SLC30A6Q6NXT4 461 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 DLEU7Q6UYE1 221 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 OLIG3Q7RTU3 272 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 SNX32Q86XE0 403 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 LURAP1LQ8IV03 231 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 POGLUT1Q8NBL1 392 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 CHDHQ8NE62 594 aaPredicted RBP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 RNF138Q8WVD3 245 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 FAR1Q8WVX9 515 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 XAGE5Q8WWM1 108 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 JSRP1Q96MG2 331 aaPredicted RBP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 SDF2Q99470 211 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 BARD1Q99728 777 aaKnown RBP11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 TTTY12Q9BZ98 90 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 AGPAT4Q9NRZ5 378 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 KLRF1Q9NZS2 232 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 VAPAQ9P0L0 249 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 PCDHGB3Q9Y5G1 929 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 SHANK1Q9Y566 2161 aa11.64□□□□□ -0.55
TSPAN9-207ENST00000539631 COL6A6A6NMZ7 2263 aa11.63□□□□□ -0.55
TSPAN9-207ENST00000539631 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms