RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 FZD5Q13467 585 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 LASP1Q14847 261 aaKnown RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 ZNF791Q3KP31 576 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 FAM209AQ5JX71 171 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 METRNLQ641Q3 311 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ZNF57Q68EA5 555 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 BICRALQ6AI39 1079 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 KIAA1161Q6NSJ0 714 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ZNF322Q6U7Q0 402 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 ZNF793Q6ZN11 406 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ANKRD33Q7Z3H0 272 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SLC37A3Q8NCC5 494 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 ACOT11Q8WXI4 607 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 C16orf58Q96GQ5 468 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 HYLS1Q96M11 299 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 WACQ9BTA9 647 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 AICDAQ9GZX7 198 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SLC38A1Q9H2H9 487 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SLC28A3Q9HAS3 691 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 FOLH1BQ9HBA9 442 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 GALNT9Q9HCQ5 603 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 MRPL39Q9NYK5 338 aaKnown RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 TNFRSF10DQ9UBN6 386 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 SLC13A4Q9UKG4 626 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 GPR55Q9Y2T6 319 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.06□□□□□ -0.96
CDH13-204ENST00000539548 KCNE3Q9Y6H6 103 aa9.06□□□□□ -0.96
CDH13-204ENST00000539548 LTBP2Q14767 1821 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ABHD14A-ACY1A0A1B0GW23 586 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 CPSF4LA6NMK7 179 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 GTPBP1O00178 669 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 PPM1DO15297 605 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 KLF4O43474 513 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 CH25HO95992 272 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ADRB3P13945 408 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 SLC6A1P30531 599 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 RFX3P48380 749 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 AGFG1P52594 562 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 ATP12AP54707 1039 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 GPR176Q14439 515 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 INSL4Q14641 139 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 SLC9A5Q14940 896 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ZIC1Q15915 447 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 PGGHGQ32M88 737 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ZNF697Q5TEC3 545 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 SLC30A6Q6NXT4 461 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ADAMTSL4Q6UY14 1074 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 KLBQ86Z14 1044 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 GHDCQ8N2G8 530 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 OR4M1Q8NGD0 313 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 OR5M3Q8NGP4 307 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 HHIPL1Q96JK4 782 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 SECISBP2Q96T21 854 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 C17orf62Q9BQA9 187 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 QRSL1Q9H0R6 528 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 CYSLTR2Q9NS75 346 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 CALML5Q9NZT1 146 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 H2AFY2Q9P0M6 372 aaPredicted RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 EXTL2Q9UBQ6 330 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 CHST2Q9Y4C5 530 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 DNMT3AQ9Y6K1 912 aaPredicted RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 DENND4AQ7Z401 1863 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 A0A1W2PR48 441 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 GLOD5A6NK44 160 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 SLC9A3R1O14745 358 aaPredicted RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 PGRMC2O15173 223 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 EMC8O43402 210 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 RNF13O43567 381 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ERAL1O75616 437 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 RGS9O75916 674 aaPredicted RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 GNRH1P01148 92 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 SERPIND1P05546 499 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 PKLRP30613 574 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 EVI2BP34910 448 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 TRHRP34981 398 aaPredicted RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 SNRPD2P62316 118 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 CSTF1Q05048 431 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 TGM3Q08188 693 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 DHCR24Q15392 516 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 FAM214AQ32MH5 1076 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 PLA1AQ53H76 456 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 C9orf64Q5T6V5 341 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 PIP5KL1Q5T9C9 394 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 MRM1Q6IN84 353 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 SMARCD3Q6STE5 483 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 ERN2Q76MJ5 926 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 C11orf74Q86VG3 221 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 LRRTM4Q86VH4 590 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 LRRC28Q86X40 367 aaPredicted RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 VRK2Q86Y07 508 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 CCDC116Q8IYX3 515 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 TTLQ8NG68 377 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 OR4M2Q8NGB6 313 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 OR8D1Q8WZ84 308 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 KCTD12Q96CX2 325 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 ZG16BQ96DA0 208 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 NECTIN4Q96NY8 510 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 OR7D2Q96RA2 312 aa9.05□□□□□ -0.96
CDH13-204ENST00000539548 GFM1Q96RP9 751 aaKnown RBP9.05□□□□□ -0.96
CDH13-204ENST00000539548 HDHD2Q9H0R4 259 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms