RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 ARSBP15848 533 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 C2orf27AQ580R0 203 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SYT14P1Q58G82 188 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 BBS10Q8TAM1 723 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 HDAC8Q9BY41 377 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SAP130Q9H0E3 1048 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 MAN2C1Q9NTJ4 1040 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SEC14L3Q9UDX4 400 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 NDOR1Q9UHB4 597 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 NTNG1Q9Y2I2 539 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 INMT-MINDY4F8WBC2 141 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SCAMP1O15126 338 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 PGRMC2O15173 223 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 MID1O15344 667 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 ADAP00813 363 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 H1F0P07305 194 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 MYL12AP19105 171 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 MMP11P24347 488 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 BUD31P41223 144 aaPredicted RBP11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC9A3P48764 834 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 SNRPNP63162 240 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 ARHGAP19Q14CB8 494 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 NDUFAF5Q5TEU4 345 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 AGBL4Q5VU57 503 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 C12orf73Q69YU5 71 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 ZER1Q7Z7L7 766 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 TRIM69Q86WT6 500 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 OR2A1Q8NGT9 310 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 RNFT2Q96EX2 444 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 AMDHD1Q96NU7 426 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 DDX31Q9H8H2 851 aaKnown RBP11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 CLCA2Q9UQC9 943 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 KCNE3Q9Y6H6 103 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 DENND4AQ7Z401 1863 aa11.79□□□□□ -0.52
SFSWAP-208ENST00000539506 ARID1BQ8NFD5 2236 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 LRIT2A6NDA9 550 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 LEUTXA8MZ59 168 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 SLC2A10O95528 541 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 ALPPP05187 535 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 ERP29P30040 261 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 RPS5P46782 204 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 OR4C11Q6IEV9 310 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 NUDT13Q86X67 352 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 MSANTD3Q96H12 275 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 MS4A3Q96HJ5 214 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 ZNF582Q96NG8 517 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 NEUROD4Q9HD90 331 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 ING3Q9NXR8 418 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 NKIRAS2Q9NYR9 191 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 PEX14O75381 377 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 ACP5P13686 325 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 BCL6P41182 706 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 SNRPGP62308 76 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 NCF4Q15080 339 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 TJAP1Q5JTD0 557 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 TOR2AQ5JU69 321 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 ANKRD54Q6NXT1 300 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 SYT9Q86SS6 491 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 TBC1D19Q8N5T2 526 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 BBS1Q8NFJ9 593 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 SUSD6Q92537 303 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 FGF13Q92913 245 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 RGMAQ96B86 450 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 MED30Q96HR3 178 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 DPCDQ9BVM2 203 aaPredicted RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 MRPL15Q9P015 296 aaKnown RBP11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 MGAT4AQ9UM21 535 aa11.78□□□□□ -0.52
SFSWAP-208ENST00000539506 OR52A4PA6NMU1 304 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 PDE9AO76083 593 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 PAK4O96013 591 aaPredicted RBP11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 CHRM4P08173 479 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 FGFBP1Q14512 234 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 TCEA2Q15560 299 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 ADCK2Q7Z695 626 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 PEX5LQ8IYB4 626 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 PROKR2Q8NFJ6 384 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 OR4K5Q8NGD3 323 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 OR6T1Q8NGN1 323 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 ZG16BQ96DA0 208 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 FERD3LQ96RJ6 166 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 KCNK6Q9Y257 313 aa11.77□□□□□ -0.52
SFSWAP-208ENST00000539506 IQCMA0A1B0GVH7 501 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 PCDH8O95206 1070 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 NFATC1O95644 943 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 PRKAR1AP10644 381 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 PIPP12273 146 aaPredicted RBP11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 MLLT3P42568 568 aaPredicted RBP11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 GIPRP48546 466 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 ABATP80404 500 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 MLLT11Q13015 90 aaPredicted RBP11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 SLC30A6Q6NXT4 461 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 ZNF730Q6ZMV8 503 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 OR8J1Q8NGP2 316 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 SUN3Q8TAQ9 357 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 C16orf58Q96GQ5 468 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 C12orf66Q96MD2 445 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 TEX101Q9BY14 249 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 OSGEPL1Q9H4B0 414 aa11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 POLMQ9NP87 494 aaPredicted RBP11.77□□□□□ -0.53
SFSWAP-208ENST00000539506 ZNF624Q9P2J8 865 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms