RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 A0A1W2PRV1 198 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 C5orf51A6NDU8 294 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 SYNGR4O95473 234 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 ECDO95905 644 aaPredicted RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 ZNF823P16415 610 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 TMOD1P28289 359 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 ACVR1BP36896 505 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 NPY2RP49146 381 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 RAG2P55895 527 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 IL9RQ01113 521 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 PUDPQ08623 228 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 PPP1R8Q12972 351 aaKnown RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 DAZ2Q13117 558 aaKnown RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 NME3Q13232 169 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 TSTA3Q13630 321 aaPredicted RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 BTG3Q14201 252 aaPredicted RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 CLPPQ16740 277 aaPredicted RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 ZNF674Q2M3X9 581 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 LGSNQ5TDP6 509 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 ASPHD2Q6ICH7 369 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 CENPSQ8N2Z9 138 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 CCDC71LQ8N9Z2 235 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 LEMD2Q8NC56 503 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 TMEM37Q8WXS4 190 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 TMEM245Q9H330 911 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 PTGES2Q9H7Z7 377 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 EXOSC3Q9NQT5 275 aaKnown RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 DAZ3Q9NR90 486 aaKnown RBP2.67□□□□□ -1.98
CCDC7-209ENST00000539197 PIGVQ9NUD9 493 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 DHRS7Q9Y394 339 aa2.67□□□□□ -1.98
CCDC7-209ENST00000539197 COL1A2P08123 1366 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 IGLV4-60A0A075B6I1 120 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 LRIT2A6NDA9 550 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 ABCD4O14678 606 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 BUB1O43683 1085 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 HOXB7P09629 217 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 SDC1P18827 310 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 RPS10P46783 165 aaKnown RBP2.66□□□□□ -1.98
CCDC7-209ENST00000539197 PITPNBP48739 271 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 BCL2L1Q07817 233 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 EPC2Q52LR7 807 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 CMPK2Q5EBM0 449 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 PRR5LQ6MZQ0 368 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 IYDQ6PHW0 289 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 DPY19L2P2Q6ZN68 376 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 ADAMTSL2Q86TH1 951 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 IQCA1Q86XH1 822 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 SERPINA12Q8IW75 414 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 OR4F17Q8NGA8 305 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 FNDC8Q8TC99 324 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 RNASE8Q8TDE3 154 aaKnown RBP2.66□□□□□ -1.98
CCDC7-209ENST00000539197 PHF10Q8WUB8 498 aaKnown RBP2.66□□□□□ -1.98
CCDC7-209ENST00000539197 OR4F4Q96R69 305 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 CNPY3Q9BT09 278 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 NLNQ9BYT8 704 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 NACA2Q9H009 215 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 C2orf40Q9H1Z8 148 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 ARGLU1Q9NWB6 273 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-209ENST00000539197 PURGQ9UJV8 347 aaKnown RBP2.66□□□□□ -1.98
CCDC7-209ENST00000539197 BARX2Q9UMQ3 279 aaPredicted RBP2.66□□□□□ -1.98
CCDC7-209ENST00000539197 PPIAL4AQ9Y536 164 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 FKBP7Q9Y680 259 aa2.66□□□□□ -1.98
CCDC7-209ENST00000539197 FAM170AA1A519 330 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 TMEM110-MUSTN1A8MSY1 372 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 NPIPA2E9PIF3 369 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 PDLIM1O00151 329 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 NME2P1O60361 137 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 MAT2AP31153 395 aaKnown RBP2.65□□□□□ -1.99
CCDC7-209ENST00000539197 NF2P35240 595 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 POU3F4P49335 361 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 SSTP61278 116 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 IL18R1Q13478 541 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 PDE7AQ13946 482 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 CAMK4Q16566 473 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 CARTPTQ16568 116 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 SLC39A12Q504Y0 691 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 SULT1C3Q6IMI6 304 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 BNIPLQ7Z465 357 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 HSD17B13Q7Z5P4 300 aaPredicted RBP2.65□□□□□ -1.99
CCDC7-209ENST00000539197 TMEM110Q86TL2 294 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 EEF2KMTQ96G04 330 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 TM2D1Q9BX74 207 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 GLIPR2Q9H4G4 154 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 ALG9Q9H6U8 611 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 COMMD8Q9NX08 183 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 LHX3Q9UBR4 397 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 CACNG2Q9Y698 323 aa2.65□□□□□ -1.99
CCDC7-209ENST00000539197 TRBV6-6A0A0A6YYG2 114 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 CCDC69A6NI79 296 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 ICOSLGO75144 302 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 IGSF6O95976 241 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 PTBP1P26599 531 aaKnown RBP eCLIP2.64□□□□□ -1.99
CCDC7-209ENST00000539197 CASP3P42574 277 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 NLRP11P59045 1033 aaKnown RBP2.64□□□□□ -1.99
CCDC7-209ENST00000539197 ARF5P84085 180 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 PTGES3Q15185 160 aaKnown RBP2.64□□□□□ -1.99
CCDC7-209ENST00000539197 PRAMEF7Q5VXH5 474 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 ZNF410Q86VK4 478 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 GPBP1Q86WP2 473 aa2.64□□□□□ -1.99
CCDC7-209ENST00000539197 C9orf40Q8IXQ3 194 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms