RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-208ENST00000538266 ZDHHC2Q9UIJ5 367 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 C3orf18Q9UK00 162 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 FBXW2Q9UKT8 454 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 TMED5Q9Y3A6 229 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PTRH2Q9Y3E5 179 aaKnown RBP4.03□□□□□ -1.76
SNHG1-208ENST00000538266 CHST2Q9Y4C5 530 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 PTGDR2Q9Y5Y4 395 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SDK2Q58EX2 2172 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 LAMA1P25391 3075 aa4.03□□□□□ -1.76
SNHG1-208ENST00000538266 SPTBN2O15020 2390 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 IGLV3-12A0A075B6K2 115 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 A0A0A6YYD5 115 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 GAGE12BA1L429 117 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SYNDIG1LA6NDD5 238 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 GAGE12HA6NDE8 117 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 IDSB3KWA1 339 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 C4orf51C9J302 202 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PEX12O00623 359 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PCDH17O14917 1159 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LSM1O15116 133 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TMPRSS11DO60235 418 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 EEDO75530 441 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 CREG1O75629 220 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SCELO95171 688 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 BMP10O95393 424 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 BAG2O95816 211 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 AIFM1O95831 613 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TBX6O95947 436 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 ONECUT2O95948 504 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 HEXBP07686 556 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FHP07954 510 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 CYC1P08574 325 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 C8orf89P0DMQ9 161 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SMIM10L1P0DMW3 83 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PRKAR1AP10644 381 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 COX7A2P14406 83 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LIFP15018 202 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 DDX5P17844 614 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TNFRSF1AP19438 455 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 NR4A1P22736 598 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PRDX6P30041 224 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 PPP2R1BP30154 601 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 OTX2P32243 289 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 BSGP35613 385 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 HPCAL1P37235 193 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 EIF2S3P41091 472 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 ASMTP46597 345 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 CPA2P48052 419 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 ALDH9A1P49189 494 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 AQP5P55064 265 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LIM2P55344 173 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 HSD17B7P56937 341 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TMPRSS3P57727 454 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 RAB38P57729 211 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TRA2BP62995 288 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TNFRSF17Q02223 184 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF763Q0D2J5 394 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TBL3Q12788 808 aaKnown RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 STX4Q12846 297 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 MED21Q13503 144 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 HEPACAMQ14CZ8 416 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 NSDHLQ15738 373 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SYT16Q17RD7 645 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 CNPY1Q3B7I2 92 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 UGT3A2Q3SY77 523 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LIN52Q52LA3 116 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LRRC23Q53EV4 343 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 VWA2Q5GFL6 755 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 XKR7Q5GH72 579 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 NDUFAF5Q5TEU4 345 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FNDC7Q5VTL7 733 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 IRAK1BP1Q5VVH5 260 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FAM219BQ5XKK7 198 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LCN10Q6JVE6 187 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 NOXRED1Q6NXP6 359 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF793Q6ZN11 406 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 COX15Q7KZN9 410 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 RAB43Q86YS6 212 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 ZNF595Q8IYB9 648 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FAM9CQ8IZT9 166 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 CA13Q8N1Q1 262 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 METTL4Q8N3J2 472 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TMEM132CQ8N3T6 1108 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 DRAXINQ8NBI3 349 aaPredicted RBP4.02□□□□□ -1.77
SNHG1-208ENST00000538266 CATSPER1Q8NEC5 780 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 C7orf57Q8NEG2 295 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 OR2T11Q8NH01 316 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 B4GALNT2Q8NHY0 566 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FAM81AQ8TBF8 368 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 STT3BQ8TCJ2 826 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 LZICQ8WZA0 190 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 TANKQ92844 425 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 APIPQ96GX9 242 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 SMIM10Q96HG1 83 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 RILPQ96NA2 401 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 FAM210AQ96ND0 272 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 IP6K3Q96PC2 410 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 BTBD9Q96Q07 612 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 THTPAQ9BU02 230 aa4.02□□□□□ -1.77
SNHG1-208ENST00000538266 C1orf50Q9BV19 199 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms