RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 DIO2Q92813 273 aa22.34■■□□□ 1.17
HMGA2-208ENST00000537429 EXTL1Q92935 676 aa22.34■■□□□ 1.17
HMGA2-208ENST00000537429 LRMDAQ9H2I8 198 aa22.34■■□□□ 1.17
HMGA2-208ENST00000537429 MRTO4Q9UKD2 239 aaKnown RBP22.34■■□□□ 1.17
HMGA2-208ENST00000537429 GSC2O15499 205 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 ALPPP05187 535 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 BCHEP06276 602 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 FBXO45P0C2W1 286 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 SOX3P41225 446 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 CDK6Q00534 326 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 CEACAM7Q14002 265 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.33■■□□□ 1.17
HMGA2-208ENST00000537429 VMACQ2NL98 169 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 SPATS1Q496A3 300 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 GPAT3Q53EU6 434 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 C19orf48Q6RUI8 117 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 LINC00696Q6ZRV3 163 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 ASRGL1Q7L266 308 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 GALNT10Q86SR1 603 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 C11orf65Q8NCR3 313 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 ASB15Q8WXK1 588 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 EFHD2Q96C19 240 aaPredicted RBP22.33■■□□□ 1.17
HMGA2-208ENST00000537429 TMEM19Q96HH6 336 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 THTPAQ9BU02 230 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 G6PC3Q9BUM1 346 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 ZNF350Q9GZX5 532 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 ABI3Q9P2A4 366 aa22.33■■□□□ 1.17
HMGA2-208ENST00000537429 TMEM247A6NEH6 219 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 OR6C70A6NIJ9 312 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 SLC28A2O43868 658 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 FCMRO60667 390 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 STX11O75558 287 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 REM1O75628 298 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 PPM1BO75688 479 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 DNAJC8O75937 253 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 OR6B1O95007 311 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ITGB2P05107 769 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 CHRM4P08173 479 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 GUSBP08236 651 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 HSD17B1P14061 328 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 KRT20P35900 424 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 TMED10P49755 219 aaKnown RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ST13P50502 369 aaKnown RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 PNLIPRP2P54317 469 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 PSMD4P55036 377 aaKnown RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 MFAP5Q13361 173 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 SCARB2Q14108 478 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 GNA13Q14344 377 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ZNF791Q3KP31 576 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ZNF468Q5VIY5 522 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ERICH5Q6P6B1 374 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ZAR1Q86SH2 424 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 TMEM156Q8N614 296 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 NFKBIDQ8NI38 313 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ADOQ96SZ5 270 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 CADM1Q9BY67 442 aaKnown RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 SLC38A1Q9H2H9 487 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 RUBCNLQ9H714 662 aa22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ZBTB20Q9HC78 741 aaPredicted RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 SEC23IPQ9Y6Y8 1000 aaKnown RBP22.32■■□□□ 1.16
HMGA2-208ENST00000537429 ELOVL7A1L3X0 281 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 CDK2AP1O14519 115 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 ZIC2O95409 532 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 H6PDO95479 791 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 RFX3P48380 749 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 CRISP3P54108 245 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 NTRK2Q16620 822 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 ST3GAL2Q16842 350 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 LRRC74BQ6ZQY2 392 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 OLIG3Q7RTU3 272 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 SPACA9Q96E40 222 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 SMAD5Q99717 465 aaKnown RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 KCTD14Q9BQ13 255 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 SAP130Q9H0E3 1048 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 POLE3Q9NRF9 147 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 CALML5Q9NZT1 146 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 WDR45Q9Y484 360 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 ZNF451Q9Y4E5 1061 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 PCDHGA9Q9Y5G4 932 aaKnown RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 ABCB7O75027 752 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 UGT2B11O75310 529 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 HTR1EP28566 365 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 IL12BP29460 328 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 PCGF2P35227 344 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 VEZF1Q14119 521 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 PRAMEF8Q5VWM4 474 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 PRAMEF7Q5VXH5 474 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 DESI1Q6ICB0 168 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 TYW3Q6IPR3 259 aaKnown RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 REEP3Q6NUK4 255 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 IGFL2Q6UWQ7 119 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 IL20RBQ6UXL0 311 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 FRRS1Q6ZNA5 592 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 MICU2Q8IYU8 434 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 DND1Q8IYX4 353 aaKnown RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 FAM156AQ8NDB6 213 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 HIPK4Q8NE63 616 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 COL21A1Q96P44 957 aa22.31■■□□□ 1.16
HMGA2-208ENST00000537429 TREX2Q9BQ50 279 aaPredicted RBP22.31■■□□□ 1.16
HMGA2-208ENST00000537429 PRORYQ9H606 182 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms