RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 GFRA1P56159 465 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 DECR1Q16698 335 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 CYP27C1Q4G0S4 372 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 RFTN2Q52LD8 501 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 AAGABQ6PD74 315 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 POMZP3Q6PJE2 187 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 ZCCHC23Q6ZST2 131 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 SZRD1Q7Z422 152 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 RIBC1Q8N443 379 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 MBD3L2Q8NHZ7 208 aaPredicted RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 ZPLD1Q8TCW7 415 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 NRGNQ92686 78 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 RNASE6Q93091 150 aaKnown RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 PPCDCQ96CD2 204 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 DTNBP1Q96EV8 351 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 METTL2AQ96IZ6 378 aaKnown RBP12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 CCT7Q99832 543 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 SH3GL2Q99962 352 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 TRMOQ9BU70 441 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 DSN1Q9H410 356 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 Q9N2J8 555 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 MKS1Q9NXB0 559 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 CRIM1Q9NZV1 1036 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 SH3BP4Q9P0V3 963 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 DNAJC15Q9Y5T4 150 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 MED12Q93074 2177 aa12.97□□□□□ -0.33
RTN3P1-201ENST00000536295 CLCA1A8K7I4 914 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 PIP5K1BO14986 540 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 LSM1O15116 133 aaKnown RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 PSMG1O95456 288 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 NUDT17P0C025 328 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 TMIGD3P0DMS9 266 aaPredicted RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 EFNA1P20827 205 aaPredicted RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 GABRA3P34903 492 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 LHX2P50458 406 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 PRKAG1P54619 331 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 FOXF2Q12947 444 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 ZNF385BQ569K4 471 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 ARL13AQ5H913 290 aaPredicted RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 FBXO30Q8TB52 745 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 TCP10LQ8TDR4 215 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 RNF138Q8WVD3 245 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 TWIST2Q8WVJ9 160 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 LMF2Q9BU23 707 aaKnown RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 REEP4Q9H6H4 257 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 DNAJB12Q9NXW2 375 aaKnown RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 MED11Q9P086 117 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 GIMAP2Q9UG22 337 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 MRTO4Q9UKD2 239 aaKnown RBP12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 TRAF6Q9Y4K3 522 aa12.96□□□□□ -0.33
RTN3P1-201ENST00000536295 GXYLT2A0PJZ3 443 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 NPIPB8E9PQR5 432 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 GMFGO60234 142 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 FADS1O60427 444 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 ZIC3O60481 467 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 NPHS1O60500 1241 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 IL33O95760 270 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 PRPS2P11908 318 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 HK1P19367 917 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 OPRM1P35372 400 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 MANFP55145 182 aaKnown RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 DSCR4P56555 118 aaPredicted RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 RAET1LQ5VY80 246 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 GALNT10Q86SR1 603 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 MARCH3Q86UD3 253 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 UBQLNLQ8IYU4 475 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 GCNT2Q8N0V5 402 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 OR2M3Q8NG83 312 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 ZFP28Q8NHY6 868 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 GPR151Q8TDV0 419 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 PIK3R3Q92569 461 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 INTS12Q96CB8 462 aaKnown RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 RMND5BQ96G75 393 aaPredicted RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 FCRL1Q96LA6 429 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 GPATCH1Q9BRR8 931 aaKnown RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 G6PC3Q9BUM1 346 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 RTN4RQ9BZR6 473 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 EML4Q9HC35 981 aaKnown RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 SDHAF3Q9NRP4 125 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 LGALS13Q9UHV8 139 aa12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 V9GYY5 206 aaPredicted RBP12.95□□□□□ -0.34
RTN3P1-201ENST00000536295 PEX11AO75192 247 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 CTAG2O75638 210 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 KCNH1O95259 989 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 UTS2O95399 124 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 CREB1P16220 341 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 ZNF708P17019 499 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 CHMP24386 653 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 PEX19P40855 299 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 CLK3P49761 638 aaKnown RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 PSMD4P55036 377 aaKnown RBP12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 CLDN18P56856 261 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 UGT3A2Q3SY77 523 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 FBXL19-AS1Q494R0 122 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 FLYWCH1Q4VC44 716 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 RNF165Q6ZSG1 346 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 LUZP2Q86TE4 346 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 EXOC3L1Q86VI1 746 aa12.94□□□□□ -0.34
RTN3P1-201ENST00000536295 GRAMD2AQ8IUY3 354 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms