RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 BBS4Q96RK4 519 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GSX2Q9BZM3 304 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ANKRA2Q9H9E1 313 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HEY2Q9UBP5 337 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ABCG2Q9UNQ0 655 aa11.7□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HMX2A2RU54 273 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZIC3O60481 467 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TNFRSF21O75509 655 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CT45A8P0DMV1 189 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CT45A9P0DMV2 189 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PPP3CBP16298 524 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TSPAN8P19075 237 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TAC1P20366 129 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TBXA2RP21731 343 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CCKARP32238 428 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 KIR2DL2P43627 348 aaPredicted RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RFX3P48380 749 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PSMD4P55036 377 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 NR1H2P55055 460 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CDH13P55290 713 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CTBP2P56545 445 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ACSM2AQ08AH3 577 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CSTF3Q12996 717 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RASA2Q15283 850 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 DECR1Q16698 335 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SPIN4Q56A73 249 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CT45A2Q5DJT8 189 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TEX35Q5T0J7 233 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ACSM2BQ68CK6 577 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ANKRD34AQ69YU3 496 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 LETMD1Q6P1Q0 360 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZDHHC24Q6UX98 284 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 NPSR1Q6W5P4 371 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RPS27LQ71UM5 84 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CDYL2Q8N8U2 506 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CDC26Q8NHZ8 85 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 UHMK1Q8TAS1 419 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 FNDC9Q8TBE3 224 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ANP32BQ92688 251 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF681Q96N22 645 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 HS3ST6Q96QI5 342 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MRPL57Q9BQC6 102 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SHCBP1LQ9BZQ2 653 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MRPL46Q9H2W6 279 aaKnown RBP11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 RNF122Q9H9V4 155 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 Q9N2J8 555 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 DSCAMO60469 2012 aa11.69□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CCDC151A5D8V7 595 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR4F21O95013 312 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 COL6A2P12110 1019 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SERPINB9P50453 376 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ATP5J2P56134 94 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 B3GALT5-AS1P59052 145 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 C8orf74Q6P047 294 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF704Q6ZNC4 412 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 FAM214BQ7L5A3 538 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CXXC5Q7LFL8 322 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 STK32CQ86UX6 486 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 FADS6Q8N9I5 356 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF610Q8N9Z0 462 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR2M3Q8NG83 312 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR5M1Q8NGP8 315 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF483Q8TF39 744 aaPredicted RBP11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MDFIQ99750 246 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TBL1XR1Q9BZK7 514 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ACSS3Q9H6R3 686 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MIEF1Q9NQG6 463 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SLC35C2Q9NQQ7 365 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MED11Q9P086 117 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MCTS1Q9ULC4 181 aaKnown RBP11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ZNF337Q9Y3M9 751 aa11.68□□□□□ -0.54
TNFRSF1A-207ENST00000535958 FBN3Q75N90 2809 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR2M5A3KFT3 312 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 A8MT66 165 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 H0YC42 278 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 MANBAO00462 879 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 EIF1AYO14602 144 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 PLOD3O60568 738 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TMCC2O75069 709 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 ULK1O75385 1050 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 NME6O75414 186 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SUPT7LO94864 414 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 SLITRK5O94991 958 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TP53P04637 393 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 NTSP30990 170 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CASQ1P31415 396 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GSTM5P46439 218 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 EIF1AXP47813 144 aaKnown RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 NCBP2P52298 156 aaKnown RBP eCLIP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GAS1P54826 345 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 TPD52P55327 224 aaPredicted RBP11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CLDN15P56746 228 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 GUCY2DQ02846 1103 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 CYP27C1Q4G0S4 372 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 LGSNQ5TDP6 509 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 WFDC8Q8IUA0 241 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR7G2Q8NG99 324 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR4N2Q8NGD1 307 aa11.67□□□□□ -0.54
TNFRSF1A-207ENST00000535958 OR6K3Q8NGY3 331 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms