RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 UMODP07911 640 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 C8orf89P0DMQ9 161 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 RAD23AP54725 363 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 ID2Q02363 134 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 KRR1Q13601 381 aaKnown RBP11.46□□□□□ -0.57
SCARB1-204ENST00000535005 NSDHLQ15738 373 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 ZNF750Q32MQ0 723 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 MFSD4BQ5TF39 518 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 FAM180BQ6P0A1 224 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 SLC2A7Q6PXP3 512 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 CCDC116Q8IYX3 515 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 MFSD4AQ8N468 514 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 OR52E4Q8NGH9 312 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 DNAJB8Q8NHS0 232 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 FAM110BQ8TC76 370 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 TSLPQ969D9 159 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 NACC2Q96BF6 587 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 ITCHQ96J02 903 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 UGT2B28Q9BY64 529 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 EPS8L2Q9H6S3 715 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 SEMA3GQ9NS98 782 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 WARS2Q9UGM6 360 aaKnown RBP11.46□□□□□ -0.57
SCARB1-204ENST00000535005 KCND3Q9UK17 655 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 TCFL5Q9UL49 500 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 PTRH2Q9Y3E5 179 aaKnown RBP11.46□□□□□ -0.57
SCARB1-204ENST00000535005 UGT2A1Q9Y4X1 527 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 AKAP13Q12802 2813 aa11.46□□□□□ -0.57
SCARB1-204ENST00000535005 LOC102723996A0A087X1L8 192 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 A0A1W2PQ72 361 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF99A8MXY4 864 aaPredicted RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 FAM47E-STBD1D6RA91 191 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 M0QX08 132 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 RGS13O14921 159 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 ERN1O75460 977 aaKnown RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 RYKP34925 604 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 DLSTP36957 453 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 FOLR3P41439 243 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 NCBP2P52298 156 aaKnown RBP eCLIP11.46□□□□□ -0.581e-7■□□□□ 9.7
SCARB1-204ENST00000535005 MANFP55145 182 aaKnown RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 MLLT10P55197 1068 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 PLIN5Q00G26 463 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 MVKQ03426 396 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 SPCS2Q15005 226 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 CTF1Q16619 201 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 PAGE3Q5JUK9 113 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 SHISA6Q6ZSJ9 500 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 ZDHHC13Q8IUH4 622 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 TMEM151BQ8IW70 566 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 CLECL1Q8IZS7 167 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 CHDHQ8NE62 594 aaPredicted RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 OR6Q1Q8NGQ2 317 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF675Q8TD23 568 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 RBM18Q96H35 190 aaKnown RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 DGAT2Q96PD7 388 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 RBM4BQ9BQ04 359 aaKnown RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 RBM4Q9BWF3 364 aaKnown RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 PAK1IP1Q9NWT1 392 aaPredicted RBP11.46□□□□□ -0.58
SCARB1-204ENST00000535005 TAS2R9Q9NYW1 312 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 DNAJB9Q9UBS3 223 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 DKK4Q9UBT3 224 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 HSPE1-MOB4S4R3N1 261 aa11.46□□□□□ -0.58
SCARB1-204ENST00000535005 A0A096LPI6 279 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 UPK1AO00322 258 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 GMNNO75496 209 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 C6orf47O95873 294 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 F8A1P23610 371 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ELK4P28324 431 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 PTPN6P29350 595 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 FOXL2P58012 376 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 HBA1P69905 142 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 CHRNB3Q05901 458 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 MGAT2Q10469 447 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 MAP4K2Q12851 820 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 SSPNQ14714 243 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ELAVL1Q15717 326 aaKnown RBP11.45□□□□□ -0.58
SCARB1-204ENST00000535005 KCNJ8Q15842 424 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 LRIF1Q5T3J3 769 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ZNF551Q7Z340 670 aaPredicted RBP11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ANKRD37Q7Z713 158 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ANKRD46Q86W74 232 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 CLEC4FQ8N1N0 589 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 IL22RA1Q8N6P7 574 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 FBLIM1Q8WUP2 373 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 METTL21AQ8WXB1 218 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 HPS1Q92902 700 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 FGF11Q92914 225 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 CTHRC1Q96CG8 243 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 NODALQ96S42 347 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ADNPQ9H2P0 1102 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 IL1RL2Q9HB29 575 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 NEUROD4Q9HD90 331 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 ADAP2Q9NPF8 381 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 FAM118AQ9NWS6 357 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 GMPR2Q9P2T1 348 aaKnown RBP11.45□□□□□ -0.58
SCARB1-204ENST00000535005 C19orf25Q9UFG5 118 aaPredicted RBP11.45□□□□□ -0.58
SCARB1-204ENST00000535005 A3GALT2U3KPV4 340 aa11.45□□□□□ -0.58
SCARB1-204ENST00000535005 M0R3G1 203 aa11.44□□□□□ -0.58
SCARB1-204ENST00000535005 TAF4O00268 1085 aa11.44□□□□□ -0.58
SCARB1-204ENST00000535005 RFXANKO14593 260 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms