RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 OPCMLQ14982 345 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 GTDC1Q4AE62 458 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 KLHL22Q53GT1 634 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 CCDC157Q569K6 752 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 PDSS1Q5T2R2 415 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 CNIH2Q6PI25 160 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 Q6ZS52 159 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 UBE2R2Q712K3 238 aaPredicted RBP8.51□□□□□ -1.05
SF3B2-216ENST00000534765 Q7L0L9 218 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 CFAP206Q8IYR0 622 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 ZFP41Q8N8Y5 198 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 RNF31Q96EP0 1072 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 DUS3LQ96G46 650 aaKnown RBP8.51□□□□□ -1.05
SF3B2-216ENST00000534765 TRMOQ9BU70 441 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 NUSAP1Q9BXS6 441 aaKnown RBP8.51□□□□□ -1.05
SF3B2-216ENST00000534765 MUC13Q9H3R2 512 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 PIGUQ9H490 435 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 IKZF5Q9H5V7 419 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 MSRAQ9UJ68 235 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 DLGAP4Q9Y2H0 992 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 LRP4O75096 1905 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 HEATR5BQ9P2D3 2071 aa8.51□□□□□ -1.05
SF3B2-216ENST00000534765 CXorf51AA0A1B0GTR3 108 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 E7EQ34 232 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 M0R082 166 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ARPC5O15511 151 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ULK1O75385 1050 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SLC16A8O95907 504 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 PCCBP05166 539 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 G6PDP11413 515 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 HOXB3P14651 431 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF30P17039 623 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CD6P30203 668 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SLC6A12P48065 614 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 RAB13P51153 203 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 RPL38P63173 70 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 TRAM2Q15035 370 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CLLU1Q5K131 121 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 C6orf136Q5SQH8 315 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 RBMS3Q6XE24 437 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 B3GLCTQ6Y288 498 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CHPFQ8IZ52 775 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 TRAM1L1Q8N609 369 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 WDR48Q8TAF3 677 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ELSPBP1Q96BH3 223 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 RDH12Q96NR8 316 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 NLNQ9BYT8 704 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ACPTQ9BZG2 426 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SRRQ9GZT4 340 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 METTL17Q9H7H0 456 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 TBC1D17Q9HA65 648 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 KLHL1Q9NR64 748 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 GSN-AS1Q9NRJ2 163 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SPHK1Q9NYA1 384 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 MRPL15Q9P015 296 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SLCO2B1O94956 709 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 LRATO95237 230 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CPSF4O95639 269 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 TBX6O95947 436 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 FPR3P25089 353 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 OC90Q02509 493 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 TNK1Q13470 666 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 KIAA0040Q15053 153 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 PRSS53Q2L4Q9 553 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 FAM74A1Q5RGS3 127 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 BEND4Q6ZU67 534 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 GPAT4Q86UL3 456 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF527Q8NB42 609 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 RELL2Q8NC24 303 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ZNF740Q8NDX6 193 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 DPY30Q9C005 99 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SAP130Q9H0E3 1048 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 C11orf16Q9NQ32 467 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SPIN1Q9Y657 262 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 EDDM13A0A1B0GTR0 161 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ANHXE9PGG2 379 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 PDYNP01213 254 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 IMPA1P29218 277 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CASP9P55211 416 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CPSF6Q16630 551 aaKnown RBP eCLIP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 HACD2Q6Y1H2 254 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 GPRIN3Q6ZVF9 776 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ERN2Q76MJ5 926 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 CEP68Q76N32 757 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 FAM124AQ86V42 546 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 PDZD9Q8IXQ8 264 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 MEIOBQ8N635 442 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 METTL6Q8TCB7 284 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 PKP4Q99569 1192 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 SDHCQ99643 169 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ADAT1Q9BUB4 502 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 DUSP21Q9H596 190 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 THUMPD1Q9NXG2 353 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 PCDHA9Q9Y5H5 950 aa8.5□□□□□ -1.05
SF3B2-216ENST00000534765 TDRD6O60522 2096 aaKnown RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 ARHGEF17Q96PE2 2063 aaPredicted RBP8.5□□□□□ -1.05
SF3B2-216ENST00000534765 EEF1E1O43324 174 aaKnown RBP8.49□□□□□ -1.05
SF3B2-216ENST00000534765 WDPCPO95876 746 aa8.49□□□□□ -1.05
SF3B2-216ENST00000534765 TPOP07202 933 aa8.49□□□□□ -1.05
SF3B2-216ENST00000534765 HLA-DMAP28067 261 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms