RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PIK3R3Q92569 461 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 MOAP1Q96BY2 351 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 C16orf58Q96GQ5 468 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 GNRHR2Q96P88 292 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 OR52B2Q96RD2 323 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 GPATCH2Q9NW75 528 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 GIN1Q9NXP7 522 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 MRTO4Q9UKD2 239 aaKnown RBP18.68■□□□□ 0.58
CCS-208ENST00000533244 WIF1Q9Y5W5 379 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 MYO7BQ6PIF6 2116 aa18.68■□□□□ 0.58
CCS-208ENST00000533244 E9PBE3 544 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 CCL21O00585 134 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 PRRG2O14669 202 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 FADS1O60427 444 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 IGKV1D-16P01601 117 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 HPNP05981 417 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 ENDOUP21128 410 aaKnown RBP18.67■□□□□ 0.58
CCS-208ENST00000533244 GDF1P27539 372 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 IL12AP29459 219 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 PRIM2P49643 509 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 PSMD4P55036 377 aaKnown RBP18.67■□□□□ 0.58
CCS-208ENST00000533244 UFM1P61960 85 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 SPANXN4Q5MJ08 99 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 ANGPTL8Q6UXH0 198 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 WDSUB1Q8N9V3 476 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 GPR151Q8TDV0 419 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 SLC9A6Q92581 669 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 MAGEB18Q96M61 343 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 DUSP22Q9NRW4 184 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 SH3BGRL2Q9UJC5 107 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 ABCG2Q9UNQ0 655 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 SNX8Q9Y5X2 465 aa18.67■□□□□ 0.58
CCS-208ENST00000533244 TRGV5A0A0B4J1U4 118 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 PRSS51A0A1B0GVH4 220 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 GNB5O14775 395 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 KCNH1O95259 989 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 TGDSO95455 350 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 IDO1P14902 403 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 EVI2BP34910 448 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 LASP1Q14847 261 aaKnown RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 PDCD4Q53EL6 469 aaKnown RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 EMC4Q5J8M3 183 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 ANXA8L1Q5VT79 327 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 CDC73Q6P1J9 531 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 CD163Q86VB7 1156 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 OR1J4Q8NGS1 313 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 NEIL3Q8TAT5 605 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 FBXO30Q8TB52 745 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 RMND5BQ96G75 393 aaPredicted RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 CCDC120Q96HB5 630 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 PHF12Q96QT6 1004 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 STACQ99469 402 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 PIGUQ9H490 435 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 FAM120CQ9NX05 1096 aaKnown RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 FLRT3Q9NZU0 649 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 MEMO1Q9Y316 297 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 ICE1Q9Y2F5 2266 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 SETXQ7Z333 2677 aaKnown RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 UTP20O75691 2785 aaKnown RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 C2orf72A6NCS6 295 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 CFLARO15519 480 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 ZG16O60844 167 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 TPOP07202 933 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 ALOX5P09917 674 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 MAN2A2P49641 1150 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 GSTA3Q16772 222 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.66■□□□□ 0.58
CCS-208ENST00000533244 FAM174BQ3ZCQ3 159 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 NXNQ6DKJ4 435 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 MTFR2Q6P444 385 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 DMRTA2Q96SC8 542 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 ACTRT3Q9BYD9 372 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 SLC6A15Q9H2J7 730 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 SDR39U1Q9NRG7 319 aaPredicted RBP18.66■□□□□ 0.58
CCS-208ENST00000533244 SPRR3Q9UBC9 169 aa18.66■□□□□ 0.58
CCS-208ENST00000533244 NCOA6Q14686 2063 aaPredicted RBP18.65■□□□□ 0.58
CCS-208ENST00000533244 FREM3P0C091 2139 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 B4DXG7 233 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 E9PLN8 166 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 BCKDKO14874 412 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 DIAPH2O60879 1101 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 KCNK2O95069 426 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 NME5P56597 212 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 TP53BP2Q13625 1128 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 SPDYE7PQ495Y7 208 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 PLCZ1Q86YW0 608 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 GLB1L3Q8NCI6 653 aaPredicted RBP18.65■□□□□ 0.58
CCS-208ENST00000533244 VPS37AQ8NEZ2 397 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 OR5AK3PQ8NH89 298 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 PHF10Q8WUB8 498 aaKnown RBP18.65■□□□□ 0.58
CCS-208ENST00000533244 OTUB1Q96FW1 271 aaPredicted RBP18.65■□□□□ 0.58
CCS-208ENST00000533244 VKORC1Q9BQB6 163 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 YIPF4Q9BSR8 244 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 LDAHQ9H6V9 325 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 ZIM2Q9NZV7 527 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 SUCOQ9UBS9 1254 aaKnown RBP18.65■□□□□ 0.58
CCS-208ENST00000533244 BTNL2Q9UIR0 455 aa18.65■□□□□ 0.58
CCS-208ENST00000533244 UQCRHLA0A096LP55 91 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 NPIPA2E9PIF3 369 aa18.64■□□□□ 0.57
CCS-208ENST00000533244 NPIPA3F8WFD2 350 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms