RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 TMCO6Q96DC7 493 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 NEURL3Q96EH8 262 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 ITCHQ96J02 903 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 SLC35G5Q96KT7 338 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 GPR137Q96N19 417 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 OR7D2Q96RA2 312 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 SLC35A5Q9BS91 424 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 DOHHQ9BU89 302 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 BTBD2Q9BX70 525 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 OSBPL11Q9BXB4 747 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 RABEP2Q9H5N1 569 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 RMND5AQ9H871 391 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 METTL7AQ9H8H3 244 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 IL1RL2Q9HB29 575 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 GALNT9Q9HCQ5 603 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 SLC6A13Q9NSD5 602 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 FBXO34Q9NWN3 711 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 FLRT3Q9NZU0 649 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 CCDC167Q9P0B6 97 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 KLHL14Q9P2G3 628 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 MRTO4Q9UKD2 239 aaKnown RBP10.98□□□□□ -0.65
SSBP3-214ENST00000533209 VPS4AQ9UN37 437 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 NPIPA1Q9UND3 350 aa10.98□□□□□ -0.65
SSBP3-214ENST00000533209 FAF1Q9UNN5 650 aaPredicted RBP10.98□□□□□ -0.65
SSBP3-214ENST00000533209 NUP214P35658 2090 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-214ENST00000533209 FAM166BA8MTA8 275 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 NR5A2O00482 541 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 RFXANKO14593 260 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ADAM10O14672 748 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 HS6ST1O60243 411 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 SNX4O95219 450 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 RFPL3SP0C7P2 107 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ZCCHC18P0CG32 403 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 MATN1P21941 496 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 GNLYP22749 145 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 UQCRFS1P47985 274 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 RFX3P48380 749 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 TRPC1P48995 793 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 GAS1P54826 345 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 KCNK10P57789 538 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 POU6F2P78424 691 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-214ENST00000533209 MRPL49Q13405 166 aaKnown RBP10.97□□□□□ -0.65
SSBP3-214ENST00000533209 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.97□□□□□ -0.65
SSBP3-214ENST00000533209 CMPK2Q5EBM0 449 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 CCNJQ5T5M9 372 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 SLC30A6Q6NXT4 461 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 FIGNL1Q6PIW4 674 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 SLC2A7Q6PXP3 512 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ZNF621Q6ZSS3 439 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 GALNT10Q86SR1 603 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 SLC22A16Q86VW1 577 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ATCAYQ86WG3 371 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 TMEM251Q8N6I4 163 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 TRIML2Q8N7C3 387 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ST6GALNAC3Q8NDV1 305 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 OR52N2Q8NGI0 321 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 OR5D16Q8NGK9 328 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ADAMTS15Q8TE58 950 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 C10orf82Q8WW14 230 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 SPDL1Q96EA4 605 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 TMEM41AQ96HV5 264 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 PHF12Q96QT6 1004 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ZDHHC11Q9H8X9 412 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 ZFP64Q9NPA5 681 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 FAM53CQ9NYF3 392 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 KLRF1Q9NZS2 232 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 BOKQ9UMX3 212 aaPredicted RBP10.97□□□□□ -0.65
SSBP3-214ENST00000533209 HRH3Q9Y5N1 445 aa10.97□□□□□ -0.65
SSBP3-214ENST00000533209 GCN1Q92616 2671 aaKnown RBP10.97□□□□□ -0.65
SSBP3-214ENST00000533209 C2orf72A6NCS6 295 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 ANKUB1A6NFN9 424 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 TFECO14948 347 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 ASNA1O43681 348 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 SOX30O94993 753 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 WISP1O95388 367 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 UTS2O95399 124 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 HOXB9P17482 250 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 LSP1P33241 339 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 EVI2BP34910 448 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 CHI3L1P36222 383 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 MAGEA5P43359 124 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 PSMD4P55036 377 aaKnown RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 CASP9P55211 416 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 GRAMD1BQ3KR37 738 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 GTDC1Q4AE62 458 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 KRTCAP3Q53RY4 240 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 PAGE3Q5JUK9 113 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 DCST2Q5T1A1 773 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 DNAJC14Q6Y2X3 702 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 BNC2Q6ZN30 1099 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 PACS2Q86VP3 889 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 CHDHQ8NE62 594 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 ZFP90Q8TF47 636 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 JSRP1Q96MG2 331 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 PAIP1Q9H074 479 aaKnown RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 DEFB127Q9H1M4 99 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 OR51I1Q9H343 314 aa10.96□□□□□ -0.65
SSBP3-214ENST00000533209 ZNF703Q9H7S9 590 aaPredicted RBP10.96□□□□□ -0.65
SSBP3-214ENST00000533209 PLSCR2Q9NRY7 297 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms