RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 PDE7AQ13946 482 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 GALNTL6Q49A17 601 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 ZNF585AQ6P3V2 769 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 ANGPTL8Q6UXH0 198 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 NPSR1Q6W5P4 371 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 B3GNT6Q6ZMB0 384 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 SPATA19Q7Z5L4 167 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 SLC44A2Q8IWA5 706 aaPredicted RBP15.22■□□□□ 0.03
PKP3-209ENST00000533069 OR1J4Q8NGS1 313 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 ZFP28Q8NHY6 868 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 MTERF3Q96E29 417 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 ELP4Q96EB1 424 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 DTNBP1Q96EV8 351 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 ZBED6CLQ96FA7 236 aaPredicted RBP15.22■□□□□ 0.03
PKP3-209ENST00000533069 TSSK3Q96PN8 268 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 TMEM45AQ9NWC5 275 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 OR10H1Q9Y4A9 318 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 DIDO1Q9BTC0 2240 aaKnown RBP15.22■□□□□ 0.03
PKP3-209ENST00000533069 CELSR2Q9HCU4 2923 aa15.22■□□□□ 0.03
PKP3-209ENST00000533069 FAM47E-STBD1D6RA91 191 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 UPK1AO00322 258 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 SNPHO15079 494 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 SLC22A2O15244 555 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 TSPAN2O60636 221 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 BCKDHAP12694 445 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 EPHA3P29320 983 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 PTPN6P29350 595 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 ADSLP30566 484 aaPredicted RBP15.21■□□□□ 0.03
PKP3-209ENST00000533069 RPL3P39023 403 aaKnown RBP15.21■□□□□ 0.03
PKP3-209ENST00000533069 TRPC1P48995 793 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 PNLIPRP2P54317 469 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 ZNHIT3Q15649 155 aaPredicted RBP15.21■□□□□ 0.03
PKP3-209ENST00000533069 CYP27C1Q4G0S4 372 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 LARP4Q71RC2 724 aaKnown RBP eCLIP15.21■□□□□ 0.03
PKP3-209ENST00000533069 MAVSQ7Z434 540 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 R3HCC1LQ7Z5L2 792 aaKnown RBP15.21■□□□□ 0.03
PKP3-209ENST00000533069 GFM2Q969S9 779 aaKnown RBP15.21■□□□□ 0.03
PKP3-209ENST00000533069 GNRHR2Q96P88 292 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 ADOQ96SZ5 270 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 RABEP2Q9H5N1 569 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 ACSS1Q9NUB1 689 aaPredicted RBP15.21■□□□□ 0.03
PKP3-209ENST00000533069 ASIC5Q9NY37 505 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 TNFRSF10DQ9UBN6 386 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 FAM215AQ9Y5M1 114 aa15.21■□□□□ 0.03
PKP3-209ENST00000533069 C15orf38-AP3S2A0A0A6YYH1 394 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 GNB5O14775 395 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 AKAP10O43572 662 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 COX6B1P14854 86 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 GPC1P35052 558 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 GCKP35557 465 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 HPCAL1P37235 193 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 PTGDSP41222 190 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 NUP107P57740 925 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 PSG6Q00889 435 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 EMX2Q04743 252 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 PMPCAQ10713 525 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 CDSNQ15517 529 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 GSTA3Q16772 222 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 SLC9B1Q4ZJI4 515 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 NHSL2Q5HYW2 709 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 C1orf185Q5T7R7 199 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 NXNQ6DKJ4 435 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 DESI1Q6ICB0 168 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 ANKRD26P1Q6NSI1 321 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 RPRMLQ8N4K4 120 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 LRRC37BQ96QE4 947 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 TTYH2Q9BSA4 534 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 LMF2Q9BU23 707 aaKnown RBP15.2■□□□□ 0.02
PKP3-209ENST00000533069 AKTIPQ9H8T0 292 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 GALNT9Q9HCQ5 603 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 Q9N2J8 555 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 MRTO4Q9UKD2 239 aaKnown RBP15.2■□□□□ 0.02
PKP3-209ENST00000533069 MAPRE3Q9UPY8 281 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 RNF6Q9Y252 685 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 WIF1Q9Y5W5 379 aa15.2■□□□□ 0.02
PKP3-209ENST00000533069 CRYBG3Q68DQ2 2970 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 UBDO15205 165 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 PEX11AO75192 247 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 NME6O75414 186 aaPredicted RBP15.19■□□□□ 0.02
PKP3-209ENST00000533069 CBR3O75828 277 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 GLI4P10075 376 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 PRPS2P11908 318 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 IDO1P14902 403 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 FRKP42685 505 aaPredicted RBP15.19■□□□□ 0.02
PKP3-209ENST00000533069 MRPL19P49406 292 aaKnown RBP15.19■□□□□ 0.02
PKP3-209ENST00000533069 ATP4BP51164 291 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 STX1BP61266 288 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 CRYZQ08257 329 aaKnown RBP15.19■□□□□ 0.02
PKP3-209ENST00000533069 HSPB3Q12988 150 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 TOMM20Q15388 145 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 SF3B4Q15427 424 aaKnown RBP eCLIP15.19■□□□□ 0.026e-6■□□□□ 11
PKP3-209ENST00000533069 DECR1Q16698 335 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 LSM12Q3MHD2 195 aaKnown RBP15.19■□□□□ 0.02
PKP3-209ENST00000533069 VPS26BQ4G0F5 336 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 RTL6Q6ICC9 239 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 ZNF551Q7Z340 670 aaPredicted RBP15.19■□□□□ 0.02
PKP3-209ENST00000533069 PM20D2Q8IYS1 436 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 ULK2Q8IYT8 1036 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 LILRB4Q8NHJ6 448 aa15.19■□□□□ 0.02
PKP3-209ENST00000533069 CLHC1Q8NHS4 586 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms