RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 KLHL36Q8N4N3 616 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 HDDC3Q8N4P3 179 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 OR4L1Q8NH43 312 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 CPNE2Q96FN4 548 aaPredicted RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR21Q99679 349 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 YIPF4Q9BSR8 244 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 FZD3Q9NPG1 666 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SDHAF3Q9NRP4 125 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 SLC22A11Q9NSA0 550 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ZFP57Q9NU63 452 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 ELOVL2Q9NXB9 296 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 TAS2R10Q9NYW0 307 aa6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 NDRG4Q9ULP0 352 aaKnown RBP6.43□□□□□ -1.38
TGFBR3-209ENST00000532540 NUP205Q92621 2012 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 OR51F1A6NGY5 319 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 M0R082 166 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 FGF10O15520 208 aaPredicted RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 OPN1SWP03999 348 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SBK2P0C263 348 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PCSK2P16519 638 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SERPINA4P29622 427 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 MNDAP41218 407 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CRISP1P54107 249 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 FOXA1P55317 472 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SNRPEP62304 92 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 EIF5AP63241 154 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 BOP1Q14137 746 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR176Q14439 515 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GANABQ14697 944 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SEC23BQ15437 767 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 ETFDHQ16134 617 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GFOD2Q3B7J2 385 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR33Q49SQ1 333 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 C6orf132Q5T0Z8 1188 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 HIST2H2AA3Q6FI13 130 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 H3F3CQ6NXT2 135 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 Q6ZPB1 254 aaPredicted RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SHFQ7M4L6 423 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CHST14Q8NCH0 376 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 ZNF548Q8NEK5 533 aaPredicted RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 OR8J1Q8NGP2 316 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PLD4Q96BZ4 506 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 FCRL4Q96PJ5 515 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 KCNH6Q9H252 994 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CSNK1G1Q9HCP0 422 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CTSFQ9UBX1 484 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 RAI2Q9Y5P3 530 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 NBASA2RRP1 2371 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 A0A1W2PP55 124 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 M0R129 80 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CHP2O43745 196 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SOX14O95416 240 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 HLA-DQB2P05538 268 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 VIPR1P32241 457 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CNR2P34972 360 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 RGS19P49795 217 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 DLX5P56178 289 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 MLLT11Q13015 90 aaPredicted RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GTF2H2Q13888 395 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CDNFQ49AH0 187 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PRSS36Q5K4E3 855 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 HACD4Q5VWC8 232 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 KDM4DQ6B0I6 523 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GTF2H2CQ6P1K8 395 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 C2orf73Q8N5S3 287 aaPredicted RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 C1orf216Q8TAB5 229 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CCDC107Q8WV48 283 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 MRPL48Q96GC5 212 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GPR137Q96N19 417 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 WDFY2Q96P53 400 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 COPS8Q99627 209 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PIP5K1AQ99755 562 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 MARVELD1Q9BSK0 173 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PLA2G2FQ9BZM2 168 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CD244Q9BZW8 370 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 LMAN1LQ9HAT1 526 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 IL21Q9HBE4 155 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PLCXD1Q9NUJ7 323 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 FAM86C1Q9NVL1 165 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 TRPS1Q9UHF7 1281 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 POMT2Q9UKY4 750 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CYP8B1Q9UNU6 501 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 KCTD3Q9Y597 815 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PCDHGA6Q9Y5G7 932 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 HYKKA2RU49 373 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 INSIG1O15503 277 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 SH3BGRLO75368 114 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 UBBP0CG47 229 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 UBCP0CG48 685 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 PTBP1P26599 531 aaKnown RBP eCLIP6.42□□□□□ -1.388e-7■■■■□ 23.2
TGFBR3-209ENST00000532540 GJA4P35212 333 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 MAPK9P45984 424 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 CAV3P56539 151 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 RPS27AP62979 156 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 UBA52P62987 128 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 AIMP2Q13155 320 aaKnown RBP6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 MICAQ29983 383 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 TOR1AIP1Q5JTV8 583 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 GCNT6Q5T4J0 391 aa6.42□□□□□ -1.38
TGFBR3-209ENST00000532540 ANXA8L1Q5VT79 327 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms