RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 SCO2O43819 266 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 FADS1O60427 444 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 CRCPO75575 148 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 PSMG1O95456 288 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 TCEA1P23193 301 aaKnown RBP15.23■□□□□ 0.03
CPSF1-207ENST00000531727 CPA2P48052 419 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 B3GALT5-AS1P59052 145 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 DNAJB13P59910 316 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 EEF1A1P68104 462 aaKnown RBP15.23■□□□□ 0.03
CPSF1-207ENST00000531727 CCDC153Q494R4 210 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 CFAP157Q5JU67 520 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 EEF1A1P5Q5VTE0 462 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 NOXRED1Q6NXP6 359 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 CAMKMTQ7Z624 323 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 OR2L13Q8N349 312 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 MBD6Q96DN6 1003 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 AMDHD1Q96NU7 426 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 ALPK1Q96QP1 1244 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 DSN1Q9H410 356 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 GLIPR2Q9H4G4 154 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 TNFRSF12AQ9NP84 129 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 RRAGDQ9NQL2 400 aaPredicted RBP15.23■□□□□ 0.03
CPSF1-207ENST00000531727 SDHAF3Q9NRP4 125 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 DDX18Q9NVP1 670 aaKnown RBP15.23■□□□□ 0.03
CPSF1-207ENST00000531727 ABCG2Q9UNQ0 655 aa15.23■□□□□ 0.03
CPSF1-207ENST00000531727 PLIN3O60664 434 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 TGM6O95932 706 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 UROSP10746 265 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 PEPDP12955 493 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 DIO3P55073 304 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 GANABQ14697 944 aaKnown RBP15.22■□□□□ 0.03
CPSF1-207ENST00000531727 DECR1Q16698 335 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 IKBIPQ70UQ0 350 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 GSPT2Q8IYD1 628 aaKnown RBP15.22■□□□□ 0.03
CPSF1-207ENST00000531727 OR2M3Q8NG83 312 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 ELP4Q96EB1 424 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 METTL2AQ96IZ6 378 aaKnown RBP15.22■□□□□ 0.03
CPSF1-207ENST00000531727 DACH2Q96NX9 599 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 YIPF4Q9BSR8 244 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 Q9N2J8 555 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 PACSIN3Q9UKS6 424 aa15.22■□□□□ 0.03
CPSF1-207ENST00000531727 ITPR3Q14573 2671 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 C2CD3Q4AC94 2353 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 A0A1W2PNV4 684 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 A8MXE2 369 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 TNFSF13O75888 250 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 IL33O95760 270 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 RAF1P04049 648 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 SHBGP04278 402 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 IFI6P09912 130 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 HK1P19367 917 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 KLK2P20151 261 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 CRHR1P34998 444 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 CCT5P48643 541 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 PPP2R2AP63151 447 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 ZNHIT3Q15649 155 aaPredicted RBP15.21■□□□□ 0.03
CPSF1-207ENST00000531727 OR2A2Q6IF42 318 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 CHMP1BQ7LBR1 199 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 P4HA3Q7Z4N8 544 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 MED12LQ86YW9 2145 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 UBQLNLQ8IYU4 475 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 LMF2Q9BU23 707 aaKnown RBP15.21■□□□□ 0.03
CPSF1-207ENST00000531727 PLEKHF2Q9H8W4 249 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 OXSMQ9NWU1 459 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 FAM120CQ9NX05 1096 aaKnown RBP15.21■□□□□ 0.03
CPSF1-207ENST00000531727 FLRT3Q9NZU0 649 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 MED11Q9P086 117 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 MRTO4Q9UKD2 239 aaKnown RBP15.21■□□□□ 0.03
CPSF1-207ENST00000531727 CCL27Q9Y4X3 112 aa15.21■□□□□ 0.03
CPSF1-207ENST00000531727 ZFHX3Q15911 3703 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 PRRC2AP48634 2157 aaKnown RBP15.2■□□□□ 0.02
CPSF1-207ENST00000531727 SH3D21A4FU49 640 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 SEC22BO75396 215 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 ATE1O95260 518 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 HRGP04196 525 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 CRHP06850 196 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 CPA3P15088 417 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 PRPH2P23942 346 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 STX5Q13190 355 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 KIAA0040Q15053 153 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 RAET1LQ5VY80 246 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 TDRPQ86YL5 185 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 MEIOBQ8N635 442 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 EIF1ADQ8N9N8 165 aaKnown RBP15.2■□□□□ 0.02
CPSF1-207ENST00000531727 CCDC63Q8NA47 563 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 EGLN2Q96KS0 407 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 RTN4RQ9BZR6 473 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 PPCSQ9HAB8 311 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 NF1P21359 2839 aa15.2■□□□□ 0.02
CPSF1-207ENST00000531727 SLC22A20A6NK97 555 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 TTC36A6NLP5 189 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 NPIPB8E9PQR5 432 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 LINC01387J3KSC0 135 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 SLC28A1O00337 649 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 MSTNO14793 375 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 PDPK1O15530 556 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 DIAPH2O60879 1101 aa15.19■□□□□ 0.02
CPSF1-207ENST00000531727 CLK3P49761 638 aaKnown RBP15.19■□□□□ 0.02
CPSF1-207ENST00000531727 PSMD4P55036 377 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms