RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 PEX1O43933 1283 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 TRIM3O75382 744 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 KCNK2O95069 426 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 RASAL1O95294 804 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 IGKV1D-16P01601 117 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 C1QCP02747 245 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 P04436 131 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 NGFRP08138 427 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SNRPB2P08579 225 aaKnown RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 MATN1P21941 496 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SOAT1P35610 550 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 CASP3P42574 277 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 PSMD4P55036 377 aaKnown RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 RPP38P78345 283 aaKnown RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.298e-12■■■■■ 42
CPSF1-206ENST00000531480 UBAP2LQ14157 1087 aaKnown RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 INPP5JQ15735 1006 aaPredicted RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 DESI1Q6ICB0 168 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 HEPHL1Q6MZM0 1159 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 DLEU7Q6UYE1 221 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 ZNF621Q6ZSS3 439 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SZRD1Q7Z422 152 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 RETREG3Q86VR2 466 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 OR2M7Q8NG81 312 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 GPR151Q8TDV0 419 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 PIK3R3Q92569 461 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SLC9A6Q92581 669 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SLC35G5Q96KT7 338 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 OR7D2Q96RA2 312 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 NODALQ96S42 347 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 ADOQ96SZ5 270 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 FAM173AQ9BQD7 235 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 YIPF4Q9BSR8 244 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 KLHL1Q9NR64 748 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 SLC25A37Q9NYZ2 338 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 LUZP4Q9P127 313 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 MRTO4Q9UKD2 239 aaKnown RBP13.27□□□□□ -0.29
CPSF1-206ENST00000531480 PCDHGB3Q9Y5G1 929 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 KCNE3Q9Y6H6 103 aa13.27□□□□□ -0.29
CPSF1-206ENST00000531480 A0A0G2JMM0 328 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 A0A1W2PPB8 328 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 A0A1W2PRS3 328 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 KIR3DP1A8MWS1 328 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 FADS1O60427 444 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 REM1O75628 298 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 GLSO94925 669 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 KCNH1O95259 989 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 AGR2O95994 175 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 AK1P00568 194 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 GSNP06396 782 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 CYP4B1P13584 511 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 GAS1P54826 345 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 RPS26P62854 115 aaKnown RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 POU6F2P78424 691 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 KRT72Q14CN4 511 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 GTDC1Q4AE62 458 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 COLEC12Q5KU26 742 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 FNDC7Q5VTL7 733 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 MTDHQ86UE4 582 aaKnown RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 SIAH3Q8IW03 269 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 FAM98AQ8NCA5 519 aaKnown RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 FAM13CQ8NE31 585 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 OR5D16Q8NGK9 328 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 ADAMTS15Q8TE58 950 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 GRHL3Q8TE85 626 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 FAR1Q8WVX9 515 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 CDS1Q92903 461 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 TMCO6Q96DC7 493 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 RMND5BQ96G75 393 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 SLX1AQ9BQ83 275 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 CCDC106Q9BWC9 280 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 OR51I1Q9H343 314 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 TPT1P8Q9HAU6 139 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 SLAMF8Q9P0V8 285 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 LEF1Q9UJU2 399 aaPredicted RBP13.26□□□□□ -0.29
CPSF1-206ENST00000531480 ABCG2Q9UNQ0 655 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 NDUFAF1Q9Y375 327 aa13.26□□□□□ -0.29
CPSF1-206ENST00000531480 NCKAP5O14513 1909 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 PINLYPA6NC86 204 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 TTLL8A6PVC2 850 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 NPIPB9F8W1W9 429 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 HMGN4O00479 90 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 FBP2O00757 339 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 SNX4O95219 450 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 KRT75O95678 551 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 CRYABP02511 175 aaKnown RBP13.25□□□□□ -0.29
CPSF1-206ENST00000531480 BMP2P12643 396 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 IL12BP29460 328 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 KRT20P35900 424 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 MEOX1P50221 254 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 TDGF1P3P51864 188 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 FUT5Q11128 374 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 ARHGAP11BQ3KRB8 267 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 PRR30Q53SZ7 412 aaPredicted RBP13.25□□□□□ -0.29
CPSF1-206ENST00000531480 RNFT1Q5M7Z0 435 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 C6orf10Q5SRN2 563 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 FAM91A1Q658Y4 838 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 BICRALQ6AI39 1079 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 SLC30A6Q6NXT4 461 aa13.25□□□□□ -0.29
CPSF1-206ENST00000531480 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms