RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 OR4K17Q8NGC6 315 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 ZNF473Q8WTR7 871 aaKnown RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 GCDHQ92947 438 aaPredicted RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 C3orf49Q96BT1 292 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 WDR34Q96EX3 536 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 MEGF10Q96KG7 1140 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 SOX7Q9BT81 388 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 EFCAB11Q9BUY7 163 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 DNAJC11Q9NVH1 559 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 XPR1Q9UBH6 696 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 OARD1Q9Y530 152 aa7.3□□□□□ -1.24
CD44-232ENST00000531118 HEATR1Q9H583 2144 aaKnown RBP7.3□□□□□ -1.24
CD44-232ENST00000531118 WASHC1A8K0Z3 465 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 GOLGA6L19H0YKK7 550 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 ABCD4O14678 606 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 CLGNO14967 610 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 ACOX3O15254 700 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 LY6HO94772 140 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 ALX3O95076 343 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 TUBBP07437 444 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 GSTP1P09211 210 aaKnown RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 ZNF37AP17032 561 aaPredicted RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 HK1P19367 917 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 IL11P20809 199 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 AGTR1P30556 359 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 TTKP33981 857 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 NR4A2P43354 598 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 PDLIM4P50479 330 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 DSCR4P56555 118 aaPredicted RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 SLAMF1Q13291 335 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 P2RY6Q15077 328 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 RAB35Q15286 201 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 SPA17Q15506 151 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 AWAT1Q58HT5 328 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 C6orf163Q5TEZ5 329 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 KHDRBS2Q5VWX1 349 aaKnown RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 OR5M10Q6IEU7 315 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 OR52E8Q6IFG1 317 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 RINLQ6ZS11 566 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 FRA10AC1Q70Z53 315 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 GABRG1Q8N1C3 465 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 ZCCHC7Q8N3Z6 543 aaKnown RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 OR7G1Q8NGA0 311 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 PIWIL2Q8TC59 973 aaKnown RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 RNF138Q8WVD3 245 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 NXNL1Q96CM4 212 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 LYARQ9NX58 379 aaKnown RBP7.29□□□□□ -1.24
CD44-232ENST00000531118 ARMCX1Q9P291 453 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 SLC17A6Q9P2U8 582 aa7.29□□□□□ -1.24
CD44-232ENST00000531118 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 OR2M5A3KFT3 312 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 NCF1BA6NI72 391 aaPredicted RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 NCF1CA8MVU1 366 aaPredicted RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 AKR1B15C9JRZ8 316 aaPredicted RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 NDUFS8O00217 210 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 PLPP1O14494 284 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 CBFA2T2O43439 604 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 TMPRSS11DO60235 418 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 TGFB1P01137 390 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 PCNAP12004 261 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 NCF1P14598 390 aaPredicted RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 MAGEA6P43360 314 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 RAP1GDS1P52306 607 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 EFNA4P52798 201 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 GAS1P54826 345 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 SARNPP82979 210 aaKnown RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 SPOCK1Q08629 439 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 GANABQ14697 944 aaKnown RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 TSNQ15631 228 aaKnown RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 FBXO48Q5FWF7 155 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 PAGE2BQ5JRK9 111 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 DEPDC1Q5TB30 811 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 OR4C11Q6IEV9 310 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 MRM1Q6IN84 353 aaKnown RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 FAM45BPQ6NSW5 357 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 CAVIN1Q6NZI2 390 aaKnown RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 TFAP2EQ6VUC0 442 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 B3GLCTQ6Y288 498 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 ADAMTSL2Q86TH1 951 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 GGNQ86UU5 652 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 MUC15Q8N387 334 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 FADS6Q8N9I5 356 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 SNX31Q8N9S9 440 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 ADCY4Q8NFM4 1077 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 OR2M3Q8NG83 312 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 OR5M1Q8NGP8 315 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 FAM45AQ8TCE6 357 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 FAM216AQ8WUB2 273 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 HSD17B8Q92506 261 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 TMCO6Q96DC7 493 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 SLC35A4Q96G79 324 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 PDLIM5Q96HC4 596 aaKnown RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 COL21A1Q96P44 957 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 HBEGFQ99075 208 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 DHRS9Q9BPW9 319 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 CAPS2Q9BXY5 557 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 ZNF717Q9BY31 904 aaPredicted RBP7.28□□□□□ -1.24
CD44-232ENST00000531118 PRRG4Q9BZD6 226 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 OR51B5Q9H339 312 aa7.28□□□□□ -1.24
CD44-232ENST00000531118 WDR41Q9HAD4 459 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms