RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 PRRC2AP48634 2157 aaKnown RBP18.94■□□□□ 0.62
SMPD1-204ENST00000530395 A0A1W2PPM1 405 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 SCO2O43819 266 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 PROCP04070 461 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 ZNF708P17019 499 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 TCEA1P23193 301 aaKnown RBP18.94■□□□□ 0.62
SMPD1-204ENST00000530395 GAS1P54826 345 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 DIO3P55073 304 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 CLDN18P56856 261 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 DNAJB13P59910 316 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 PSG6Q00889 435 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 DECR1Q16698 335 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 CHMP1BQ7LBR1 199 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 LUZP2Q86TE4 346 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 CCDC63Q8NA47 563 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 LINC01560Q8TB33 94 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.94■□□□□ 0.62
SMPD1-204ENST00000530395 YIPF4Q9BSR8 244 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 PPCSQ9HAB8 311 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 Q9N2J8 555 aa18.94■□□□□ 0.62
SMPD1-204ENST00000530395 RPH3AQ9Y2J0 694 aaPredicted RBP18.94■□□□□ 0.62
SMPD1-204ENST00000530395 UROSP10746 265 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 PEPDP12955 493 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 CD99P14209 185 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 CLK3P49761 638 aaKnown RBP18.93■□□□□ 0.62
SMPD1-204ENST00000530395 PSMD4P55036 377 aaKnown RBP18.93■□□□□ 0.62
SMPD1-204ENST00000530395 PPP2R2AP63151 447 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 GANABQ14697 944 aaKnown RBP18.93■□□□□ 0.62
SMPD1-204ENST00000530395 BCL2A1Q16548 175 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 NOXRED1Q6NXP6 359 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 PAMR1Q6UXH9 720 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 P4HA3Q7Z4N8 544 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 CAMKMTQ7Z624 323 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 GSPT2Q8IYD1 628 aaKnown RBP18.93■□□□□ 0.62
SMPD1-204ENST00000530395 GCNT2Q8N0V5 402 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 METTL2AQ96IZ6 378 aaKnown RBP18.93■□□□□ 0.62
SMPD1-204ENST00000530395 G6PC3Q9BUM1 346 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 GLIPR2Q9H4G4 154 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 GALNT8Q9NY28 637 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 PACSIN3Q9UKS6 424 aa18.93■□□□□ 0.62
SMPD1-204ENST00000530395 ZIC3O60481 467 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 PLIN3O60664 434 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 CRHR1P34998 444 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 RAET1LQ5VY80 246 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 OR2A2Q6IF42 318 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 TGIF2LYQ8IUE0 185 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 OR2L13Q8N349 312 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 MEIOBQ8N635 442 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 FADS6Q8N9I5 356 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 UBLCP1Q8WVY7 318 aaPredicted RBP18.92■□□□□ 0.62
SMPD1-204ENST00000530395 AMDHD1Q96NU7 426 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 DACH2Q96NX9 599 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 ALPK1Q96QP1 1244 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 DSN1Q9H410 356 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 PTGES2Q9H7Z7 377 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 C3orf14Q9HBI5 128 aa18.92■□□□□ 0.62
SMPD1-204ENST00000530395 FAM120CQ9NX05 1096 aaKnown RBP18.92■□□□□ 0.62
SMPD1-204ENST00000530395 FLNAP21333 2647 aaKnown RBP18.92■□□□□ 0.62
SMPD1-204ENST00000530395 UPK1AO00322 258 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 COPEO14579 308 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 HCRTR2O43614 444 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 SEC22BO75396 215 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 PSMG1O95456 288 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 IFI6P09912 130 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 CPA3P15088 417 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 HK1P19367 917 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 EEFSECP57772 596 aaKnown RBP18.91■□□□□ 0.62
SMPD1-204ENST00000530395 STX5Q13190 355 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 PRSS53Q2L4Q9 553 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 PLXDC2Q6UX71 529 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 SH2D5Q6ZV89 423 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 EIF1ADQ8N9N8 165 aaKnown RBP18.91■□□□□ 0.62
SMPD1-204ENST00000530395 OR2M3Q8NG83 312 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 ELP4Q96EB1 424 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 TMUB1Q9BVT8 246 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 OXSMQ9NWU1 459 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 MID2Q9UJV3 735 aa18.91■□□□□ 0.62
SMPD1-204ENST00000530395 A0A1W2PNV4 684 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 SLC22A20A6NK97 555 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 SMIM23A6NLE4 172 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 TTC36A6NLP5 189 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 LINC01387J3KSC0 135 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 SLC28A1O00337 649 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 RGS14O43566 566 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 FADS1O60427 444 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 IL33O95760 270 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 RAF1P04049 648 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 CRHP06850 196 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 PRPH2P23942 346 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 CPOXP36551 454 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 RFX3P48380 749 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 B3GALT5-AS1P59052 145 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 LIPMQ5VYY2 423 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 TDRPQ86YL5 185 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 UBQLNLQ8IYU4 475 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 MBD6Q96DN6 1003 aa18.9■□□□□ 0.62
SMPD1-204ENST00000530395 LMF2Q9BU23 707 aaKnown RBP18.9■□□□□ 0.62
SMPD1-204ENST00000530395 IQCGQ9H095 443 aaKnown RBP18.9■□□□□ 0.62
SMPD1-204ENST00000530395 NIPBLQ6KC79 2804 aaeCLIP18.9■□□□□ 0.62
SMPD1-204ENST00000530395 SH3D21A4FU49 640 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 6.1 ms