RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 BNIP1Q12981 228 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 KCNAB2Q13303 367 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 GAB1Q13480 694 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 GANABQ14697 944 aaKnown RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 ST3GAL2Q16842 350 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 LACTB2Q53H82 288 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 FAM219BQ5XKK7 198 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 AP1ARQ63HQ0 302 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 HEPHL1Q6MZM0 1159 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 RPUSD3Q6P087 351 aaKnown RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 TNFAIP8L2Q6P589 184 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 DGAT2L6Q6ZPD8 337 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 NET1Q7Z628 596 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF619Q8N2I2 560 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 FBXW8Q8N3Y1 598 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 SIRT6Q8N6T7 355 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 SLC16A11Q8NCK7 471 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 FAM13CQ8NE31 585 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 TOR1AIP2Q8NFQ8 470 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 SLC26A7Q8TE54 656 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 SLC35B4Q969S0 331 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 RMND5BQ96G75 393 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 KCTD14Q9BQ13 255 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 CPPED1Q9BRF8 314 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 BTBD10Q9BSF8 475 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 NXF5Q9H1B4 397 aaKnown RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 ZNF552Q9H707 407 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 KAT8Q9H7Z6 458 aaKnown RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 PTGES2Q9H7Z7 377 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 IL1RL2Q9HB29 575 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 BCL2L10Q9HD36 194 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.32□□□□□ -1.24
SSBP3-211ENST00000528787 ADPRHL2Q9NX46 363 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 MAP10Q9P2G4 905 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 ABCD2Q9UBJ2 740 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 MAGEL2Q9UJ55 1249 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 RPS6KA6Q9UK32 745 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 BAG5Q9UL15 447 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 WDR45Q9Y484 360 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 PCDHGA10Q9Y5H3 936 aa7.32□□□□□ -1.24
SSBP3-211ENST00000528787 WDFY3Q8IZQ1 3526 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 MYOCOSA0A1B0GUC4 107 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 A0A1W2PS29 197 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ELOVL7A1L3X0 281 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ASPDHA6ND91 283 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 HRKO00198 91 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 HMGN4O00479 90 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 DNAJC8O75937 253 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 UBOX5O94941 541 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 KCNK2O95069 426 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 CBX6O95503 412 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 CRYABP02511 175 aaKnown RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 CLPSP04118 112 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 OR12D1P0DN82 309 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ARAFP10398 606 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 HSD17B1P14061 328 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 IL7RP16871 459 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 EFNA1P20827 205 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 TBXA2RP21731 343 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 FKBP2P26885 142 aaKnown RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 HTR1EP28566 365 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 PCGF2P35227 344 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ADH7P40394 386 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 SLC6A8P48029 635 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 EFNA3P52797 238 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ATP12AP54707 1039 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 SUMO3P55854 103 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 MTPNP58546 118 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 Q0VFX4 171 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 DUSP8Q13202 625 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 SCARB2Q14108 478 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 CAPRIN1Q14444 709 aaKnown RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 OR1C1Q15619 314 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 DUSP5Q16690 384 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 PRSS53Q2L4Q9 553 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 VMACQ2NL98 169 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 FLYWCH1Q4VC44 716 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 LIN52Q52LA3 116 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 ATP1A1-AS1Q5TC04 95 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 C6orf89Q6UWU4 347 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 EIF3MQ7L2H7 374 aaKnown RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 RETREG3Q86VR2 466 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 DEFB107AQ8IZN7 70 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 EID3Q8N140 333 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 BEST3Q8N1M1 668 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 BCORP1Q8N888 145 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 FDCSPQ8NFU4 85 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 OR10A6Q8NH74 314 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 FAM110BQ8TC76 370 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 PAQR8Q8TEZ7 354 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 THAP3Q8WTV1 239 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 PSMF1Q92530 271 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 NR4A3Q92570 626 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 CDS1Q92903 461 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 TMBIM1Q969X1 311 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 LRGUKQ96M69 825 aa7.31□□□□□ -1.24
SSBP3-211ENST00000528787 UBL7Q96S82 380 aaPredicted RBP7.31□□□□□ -1.24
SSBP3-211ENST00000528787 SDF2Q99470 211 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms