RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 C10orf107Q8IVU9 208 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 C4orf33Q8N1A6 199 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 GOLGA6L1Q8N7Z2 621 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 OR4N2Q8NGD1 307 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 CDC26Q8NHZ8 85 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 FAM222BQ8WU58 562 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 WNT2BQ93097 391 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 FCRL1Q96LA6 429 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 CCT7Q99832 543 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 GATA5Q9BWX5 397 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-207ENST00000527189 ROPN1BQ9BZX4 212 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-207ENST00000527189 ROPN1Q9HAT0 212 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-207ENST00000527189 C3orf14Q9HBI5 128 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 LRTM1Q9HBL6 345 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 HHATLQ9HCP6 504 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 Q9N2J8 555 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 TNFRSF12AQ9NP84 129 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 DDX18Q9NVP1 670 aaKnown RBP12.17□□□□□ -0.46
CAPN1-207ENST00000527189 JKAMPQ9P055 326 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 ITGB1BP2Q9UKP3 347 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 CBLCQ9ULV8 474 aa12.17□□□□□ -0.46
CAPN1-207ENST00000527189 MAP1AP78559 2803 aaPredicted RBP12.17□□□□□ -0.46
CAPN1-207ENST00000527189 TLDC2A0PJX2 215 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 KDM4EB2RXH2 506 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 LINC01387J3KSC0 135 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 FADS1O60427 444 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 ZIC3O60481 467 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 NPHS1O60500 1241 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 NME6O75414 186 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 RCBTB2O95199 551 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 DDX5P17844 614 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 DPP4P27487 766 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 UQCRC1P31930 480 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 EVI2BP34910 448 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 CLK3P49761 638 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 ZNF155Q12901 538 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 GAB1Q13480 694 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 GANABQ14697 944 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 PCLAFQ15004 111 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 CLEC6AQ6EIG7 209 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 HDXQ7Z353 690 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 TMEM200AQ86VY9 491 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 BANPQ8N9N5 519 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 CEP70Q8NHQ1 597 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 GOT1L1Q8NHS2 421 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 EFHD2Q96C19 240 aaPredicted RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 MTERF3Q96E29 417 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 APOPT1Q96IL0 206 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 EGLN2Q96KS0 407 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 TUBA1CQ9BQE3 449 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 LMF2Q9BU23 707 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 SFXN3Q9BWM7 321 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 C12orf65Q9H3J6 166 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 EML4Q9HC35 981 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 FAM120CQ9NX05 1096 aaKnown RBP12.16□□□□□ -0.46
CAPN1-207ENST00000527189 FBXL2Q9UKC9 423 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 RAB21Q9UL25 225 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 EDARQ9UNE0 448 aa12.16□□□□□ -0.46
CAPN1-207ENST00000527189 H0Y3Z8 333 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 IL33O95760 270 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 TMIGD3P0DMS9 266 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 PRPS2P11908 318 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 ZNF708P17019 499 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 TACR1P25103 407 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 SERPINB5P36952 375 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 FRKP42685 505 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 LHX2P50458 406 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 DGKQP52824 942 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 WNT3P56703 355 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 SORDQ00796 357 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 DAZAP2Q15038 168 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 GLYR1Q49A26 553 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 VPS26BQ4G0F5 336 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 FLYWCH1Q4VC44 716 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 KANK2Q63ZY3 851 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 TRABD2AQ86V40 505 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 FADS6Q8N9I5 356 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 OR4K17Q8NGC6 315 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 ZFP28Q8NHY6 868 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 HOXB13Q92826 284 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 NINJ1Q92982 152 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 ZBED6CLQ96FA7 236 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 SFXN2Q96NB2 322 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 TUBB1Q9H4B7 451 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 REEP4Q9H6H4 257 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 PTGES2Q9H7Z7 377 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 ANKZF1Q9H8Y5 726 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 RASSF1Q9NS23 344 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 ACSS1Q9NUB1 689 aaPredicted RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 DNAJB12Q9NXW2 375 aaKnown RBP12.15□□□□□ -0.46
CAPN1-207ENST00000527189 NTMQ9P121 344 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 PPP4R1LQ9P1A2 415 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 LGALS13Q9UHV8 139 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 DKKL1Q9UK85 242 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 TRAF6Q9Y4K3 522 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 DNAJC15Q9Y5T4 150 aa12.15□□□□□ -0.46
CAPN1-207ENST00000527189 LSM1O15116 133 aaKnown RBP12.14□□□□□ -0.47
CAPN1-207ENST00000527189 PDPK1O15530 556 aa12.14□□□□□ -0.47
CAPN1-207ENST00000527189 RRP9O43818 475 aaKnown RBP12.14□□□□□ -0.47
CAPN1-207ENST00000527189 GOSR1O95249 250 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms