RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 GJD3Q8N144 294 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 ANKK1Q8NFD2 765 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 OR4K14Q8NGD5 310 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 OR4Q3Q8NH05 313 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 SLC22A18Q96BI1 424 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 MRPL38Q96DV4 380 aaKnown RBP16.42■□□□□ 0.22
USH1C-205ENST00000527020 MRGPRX1Q96LB2 322 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 MCHR1Q99705 422 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 KLHL25Q9H0H3 589 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 CRNNQ9UBG3 495 aaPredicted RBP16.42■□□□□ 0.22
USH1C-205ENST00000527020 DAPP1Q9UN19 280 aa16.42■□□□□ 0.22
USH1C-205ENST00000527020 LOC105369274A0A096LPK9 316 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 LOC102723532A0A0G2JNH3 316 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 PNMA8CA0A1B0GUJ8 204 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 PLD2O14939 933 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 PIP5K1CO60331 668 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 RASGRP1O95267 797 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 APBB3O95704 486 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 GNSP15586 552 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 RGS8P57771 180 aaPredicted RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 BNC1Q01954 994 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 DLX2Q07687 328 aaPredicted RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 RAB40BQ12829 278 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 SUZ12Q15022 739 aaKnown RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 MINDY4Q4G0A6 757 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 CLEC12AQ5QGZ9 265 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 ZNF836Q6ZNA1 936 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 OR4N4Q8N0Y3 316 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 POGLUT1Q8NBL1 392 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 PIGXQ8TBF5 258 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 ACOT11Q8WXI4 607 aaPredicted RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 SLC30A2Q9BRI3 323 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 SNTG1Q9NSN8 517 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 TXNL4BQ9NX01 149 aaKnown RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 KLHL3Q9UH77 587 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 MRPS2Q9Y399 296 aaKnown RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 DUXAA6NLW8 204 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 POLR2CP19387 275 aaPredicted RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 FPR3P25089 353 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 CD79BP40259 229 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 WNT4P56705 351 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 GPR18Q14330 331 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 ARHGAP11BQ3KRB8 267 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 FHL5Q5TD97 284 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 FIGLAQ6QHK4 219 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 PLEKHM3Q6ZWE6 761 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 DOK4Q8TEW6 326 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 TMEM255BQ8WV15 326 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 ASB15Q8WXK1 588 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 HPS1Q92902 700 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 SLC41A3Q96GZ6 507 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 MTHFD2LQ9H903 347 aaPredicted RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 SIAEQ9HAT2 523 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 KLHL28Q9NXS3 571 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 SSR3Q9UNL2 185 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 YARS2Q9Y2Z4 477 aaKnown RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 SF3B6Q9Y3B4 125 aaKnown RBP16.41■□□□□ 0.22
USH1C-205ENST00000527020 SLC22A7Q9Y694 548 aa16.41■□□□□ 0.22
USH1C-205ENST00000527020 TMEM129A0AVI4 362 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 LOC110117498-PIK3R3F6TDL0 507 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 AP3D1O14617 1153 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 LRRTM2O43300 516 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 LIMS3P0CW19 117 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 LIMS4P0CW20 117 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 GPR4P46093 362 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 MTNR1AP48039 350 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 EIF2B2P49770 351 aaKnown RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 ZNF136P52737 540 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 ALG11Q2TAA5 492 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 SLC30A6Q6NXT4 461 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 USP53Q70EK8 1073 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 GDPD3Q7L5L3 318 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 SHFQ7M4L6 423 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 NRMQ8IXM6 262 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 TMEFF1Q8IYR6 380 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 ZNF485Q8NCK3 441 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 PIK3R3Q92569 461 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 NELL2Q99435 816 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 ERVK13-1Q9NX77 482 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 IL20Q9NYY1 176 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 ACTR10Q9NZ32 417 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 NCKAP1Q9Y2A7 1128 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 WDR45Q9Y484 360 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 SPIN1Q9Y657 262 aaPredicted RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 MN1Q10571 1320 aaPredicted RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 GSAPA4D1B5 854 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 OR6C74A6NCV1 312 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 ZNF860A6NHJ4 632 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 SURF4O15260 269 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 B3GALT2O43825 422 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 OR5F1O95221 314 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 DLGAP3O95886 979 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 CPMP14384 443 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 MYL12AP19105 171 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 HNRNPA2B1P22626 353 aaKnown RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 RORCP51449 518 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 EEF1A1P68104 462 aaKnown RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 ID2Q02363 134 aa16.4■□□□□ 0.22
USH1C-205ENST00000527020 TRMT12Q53H54 448 aaKnown RBP16.4■□□□□ 0.22
USH1C-205ENST00000527020 ZNF628Q5EBL2 1059 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms