RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 NTMQ9P121 344 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 C19orf25Q9UFG5 118 aaPredicted RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 PSME2Q9UL46 239 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 DTX4Q9Y2E6 619 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 ANK3Q12955 4377 aaKnown RBP10.02□□□□□ -0.81
NEDD8-204ENST00000526430 ABCA1O95477 2261 aa10.02□□□□□ -0.81
NEDD8-204ENST00000526430 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 UPK1AO00322 258 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 PLOD2O00469 737 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 PLOD3O60568 738 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 SLC22A3O75751 556 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 COX7A2P14406 83 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 PCSK2P16519 638 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 HOXB9P17482 250 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 PTPN6P29350 595 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 MAP3K8P41279 467 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 EMDP50402 254 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 CDK9P50750 372 aaKnown RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ATP4BP51164 291 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ARFIP2P53365 341 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 OC90Q02509 493 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 EXOSC7Q15024 291 aaKnown RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 MAPKAPK3Q16644 382 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 BTBD16Q32M84 506 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 CMPK2Q5EBM0 449 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 CPTPQ5TA50 214 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 PODNL1Q6PEZ8 512 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 R3HCC1LQ7Z5L2 792 aaKnown RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 C9orf40Q8IXQ3 194 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 CLECL1Q8IZS7 167 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 LRRC25Q8N386 305 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ZNF441Q8N8Z8 693 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 OR5M3Q8NGP4 307 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 OR14A16Q8NHC5 309 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 C16orf52Q8NHV5 167 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 HOXB13Q92826 284 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ADIPOR1Q96A54 375 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 GIMAP5Q96F15 307 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 FBXL20Q96IG2 436 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 DUSP26Q9BV47 211 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 BHLHE41Q9C0J9 482 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 OR8D2Q9GZM6 311 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 LIN28AQ9H9Z2 209 aaKnown RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 MIEF1Q9NQG6 463 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 SAR1AQ9NR31 198 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 SLC6A13Q9NSD5 602 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ACSS1Q9NUB1 689 aaPredicted RBP10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ERVK-19Q9WJR5 959 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 CLCA3PQ9Y6N3 262 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 ZNF780BQ9Y6R6 833 aa10.01□□□□□ -0.81
NEDD8-204ENST00000526430 HEATR5AQ86XA9 2040 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 A0A1W2PRB8 838 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 SYT5O00445 386 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 C6orf47O95873 294 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 TROVE2P10155 538 aaKnown RBP eCLIP10□□□□□ -0.81
NEDD8-204ENST00000526430 TNNI3P19429 210 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 NT5EP21589 574 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 ACVR2AP27037 513 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 MPIP34949 423 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 ST13P50502 369 aaKnown RBP10□□□□□ -0.81
NEDD8-204ENST00000526430 NCBP2P52298 156 aaKnown RBP eCLIP10□□□□□ -0.81
NEDD8-204ENST00000526430 HBA1P69905 142 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 RNF4P78317 190 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 PLIN5Q00G26 463 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 EXT1Q16394 746 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 FAM174BQ3ZCQ3 159 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 ZNF468Q5VIY5 522 aaPredicted RBP10□□□□□ -0.81
NEDD8-204ENST00000526430 BLOC1S3Q6QNY0 202 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 LYPD8Q6UX82 237 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 ZNF227Q86WZ6 799 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 GALNT12Q8IXK2 581 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 OR2L13Q8N349 312 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 SLC5A8Q8N695 610 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 C7orf57Q8NEG2 295 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 VMP1Q96GC9 406 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 CCT8L2Q96SF2 557 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 PELOQ9BRX2 385 aaKnown RBP10□□□□□ -0.81
NEDD8-204ENST00000526430 TTYH2Q9BSA4 534 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 INPP5KQ9BT40 448 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 MYLK2Q9H1R3 596 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 OR10A5Q9H207 317 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 CXorf36Q9H7Y0 433 aa10□□□□□ -0.81
NEDD8-204ENST00000526430 TRIM45Q9H8W5 580 aaPredicted RBP10□□□□□ -0.81
NEDD8-204ENST00000526430 C19orf53Q9UNZ5 99 aaPredicted RBP10□□□□□ -0.81
NEDD8-204ENST00000526430 A0A087WV62 115 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 A0A0G2JNJ9 132 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 TRBV11-1A0A0K0K1C0 115 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 PRSS51A0A1B0GVH4 220 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 SYNDIG1LA6NDD5 238 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 RNASET2O00584 256 aaKnown RBP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 PDPK1O15530 556 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 OR10H2O60403 315 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CDC40O60508 579 aaKnown RBP eCLIP9.99□□□□□ -0.81
NEDD8-204ENST00000526430 IFNA2P01563 188 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 PGRP06401 933 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 IFI6P09912 130 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 BMP7P18075 431 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CDKN2CP42773 168 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 CLCN2P51788 898 aa9.99□□□□□ -0.81
NEDD8-204ENST00000526430 MLF1P58340 268 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms