RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RNF215Q9Y6U7 377 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 BDP1A6H8Y1 2624 aa4.21□□□□□ -1.74
USP48-211ENST00000526044 ZDBF2Q9HCK1 2354 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 A0A0A0MQY5 61 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 KRT87PA6NCN2 255 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 OR6C74A6NCV1 312 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ERICH4A6NGS2 130 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 A8MT66 165 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 C17orf100A8MU93 164 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 C2orf74A8MZ97 194 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 H3BQF6 201 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 K7EPI3 171 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 BTN3A3O00478 584 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 E2F3O00716 465 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 TNFSF14O43557 240 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 SIX3O95343 332 aaPredicted RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 PGM3O95394 542 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 CBX6O95503 412 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 MLYCDO95822 493 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 PROS1P07225 676 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ERGP11308 486 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 GNAZP19086 355 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 POLR2CP19387 275 aaPredicted RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 ACP1P24666 158 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 CD1CP29017 333 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 IMPA1P29218 277 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 EEF1DP29692 281 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 PRDX3P30048 256 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 ARRB2P32121 409 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 THBS3P49746 956 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 HTR6P50406 440 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 CDH13P55290 713 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 TMPRSS3P57727 454 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 SELENOVP59797 346 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 ZP1P60852 638 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 NAA20P61599 178 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 HERVK_113P63132 956 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ROR2Q01974 943 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 PRDX1Q06830 199 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 C17orf67Q0P5P2 114 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 STX3Q13277 289 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 GTF2H2Q13888 395 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 FASTKQ14296 549 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 KIR2DS3Q14952 304 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 NR1D2Q14995 579 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 PCLAFQ15004 111 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 PPA1Q15181 289 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 CHI3L2Q15782 390 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 C18orf21Q32NC0 220 aaPredicted RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 AMZ1Q400G9 498 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 UNC50Q53HI1 259 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 FBXO48Q5FWF7 155 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 SH2D4BQ5SQS7 431 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ZNF678Q5SXM1 525 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 NKAIN2Q5VXU1 208 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ATG16L1Q676U5 607 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 GTF2H2CQ6P1K8 395 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 GUSBP11Q6P575 273 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 TMEM71Q6P5X7 295 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 SUSD1Q6UWL2 747 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 LCTLQ6UWM7 567 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 MBOAT1Q6ZNC8 495 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 LRRC70Q7Z2Q7 622 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 EFL1Q7Z2Z2 1120 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 SERPINA11Q86U17 422 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 THOC6Q86W42 341 aaKnown RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 OOSP2Q86WS3 158 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 NAXDQ8IW45 347 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 KIAA2013Q8IYS2 634 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 OR8H3Q8N146 312 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 SNX31Q8N9S9 440 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 LMNTD1Q8N9Z9 388 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 OR10G6Q8NH81 332 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 FAM76AQ8TAV0 307 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 HMGCLL1Q8TB92 370 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ADAMTS15Q8TE58 950 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 OIT3Q8WWZ8 545 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ZNF75CPQ92670 426 aaPredicted RBP4.2□□□□□ -1.74
USP48-211ENST00000526044 PYCR2Q96C36 320 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 L3HYPDHQ96EM0 354 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 MOCOSQ96EN8 888 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 RNFT2Q96EX2 444 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 CNDP1Q96KN2 507 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 MARK4Q96L34 752 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 NRTNQ99748 197 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 HAUS8Q9BT25 410 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 ERVK-6Q9BXR3 956 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 RAB33BQ9H082 229 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 OR10A4Q9H209 315 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 KLHL31Q9H511 634 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 DNAJC11Q9NVH1 559 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 OPTCQ9UBM4 332 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 SNX7Q9UNH6 387 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 KCNE2Q9Y6J6 123 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 A0A0C4DFX4 3053 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 MUC3AQ02505 3323 aa4.2□□□□□ -1.74
USP48-211ENST00000526044 COL5A1P20908 1838 aaPredicted RBP4.19□□□□□ -1.74
USP48-211ENST00000526044 IGHV1OR21-1A0A087WYE8 117 aa4.19□□□□□ -1.74
USP48-211ENST00000526044 A0A1W2PPV9 198 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms