RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 AP1ARQ63HQ0 302 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 FAM91A1Q658Y4 838 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 HEPHL1Q6MZM0 1159 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 GALNTL5Q7Z4T8 443 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 DHDDSQ86SQ9 333 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 SNX32Q86XE0 403 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 RNF130Q86XS8 419 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 MSRB3Q8IXL7 192 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 CHDHQ8NE62 594 aaPredicted RBP19.06■□□□□ 0.64
CD44-222ENST00000526025 OR52N2Q8NGI0 321 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 FBXO30Q8TB52 745 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 CDS1Q92903 461 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 ADOQ96SZ5 270 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 KLHL1Q9NR64 748 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 EXD2Q9NVH0 621 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 SLC25A37Q9NYZ2 338 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 ABCG2Q9UNQ0 655 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 CORO2BQ9UQ03 480 aa19.06■□□□□ 0.64
CD44-222ENST00000526025 EIF4E1BA6NMX2 242 aaKnown RBP19.05■□□□□ 0.64
CD44-222ENST00000526025 CLIC1O00299 241 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 FBP2O00757 339 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 SUV39H1O43463 412 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 HS6ST1O60243 411 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 PRDX6P30041 224 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 GTDC1Q4AE62 458 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 ATAD3BQ5T9A4 648 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 SULF2Q8IWU5 870 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 OR5D16Q8NGK9 328 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 EFHD2Q96C19 240 aaPredicted RBP19.05■□□□□ 0.64
CD44-222ENST00000526025 LRRC37BQ96QE4 947 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 FAM173AQ9BQD7 235 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 ANGPTL4Q9BY76 406 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 HES7Q9BYE0 225 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 POLE3Q9NRF9 147 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 VAPAQ9P0L0 249 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 SLAMF8Q9P0V8 285 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 LIPT1Q9Y234 373 aa19.05■□□□□ 0.64
CD44-222ENST00000526025 PEX1O43933 1283 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 SNX4O95219 450 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 RASAL1O95294 804 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 BMP2P12643 396 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 CYP4B1P13584 511 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 TRMT5Q32P41 509 aaKnown RBP19.04■□□□□ 0.64
CD44-222ENST00000526025 ARHGAP11BQ3KRB8 267 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 DCST2Q5T1A1 773 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 REP15Q6BDI9 236 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 SLC30A6Q6NXT4 461 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 TNFAIP8L2Q6P589 184 aaPredicted RBP19.04■□□□□ 0.64
CD44-222ENST00000526025 ANGPTL8Q6UXH0 198 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 ZNF843Q8N446 348 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 ZFP62Q8NB50 900 aaPredicted RBP19.04■□□□□ 0.64
CD44-222ENST00000526025 PCYOX1LQ8NBM8 494 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 CCDC197Q8NCU1 140 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 OR2M7Q8NG81 312 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 OIT3Q8WWZ8 545 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 CMTM5Q96DZ9 223 aa19.04■□□□□ 0.64
CD44-222ENST00000526025 PRAMEF25A6NGN4 478 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 B8ZZF3 427 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 HMGN4O00479 90 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 C1QL1O75973 258 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 UNC5CO95185 931 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 IGKV1D-16P01601 117 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 COX4I1P13073 169 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 CASP3P42574 277 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 NFYCQ13952 458 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 MMEL1Q495T6 779 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 TREML1Q86YW5 311 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 OR5M3Q8NGP4 307 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 OTUB1Q96FW1 271 aaPredicted RBP19.03■□□□□ 0.64
CD44-222ENST00000526025 AURKBQ96GD4 344 aaPredicted RBP19.03■□□□□ 0.64
CD44-222ENST00000526025 FRMD6Q96NE9 622 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 ANKRD27Q96NW4 1050 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 NODALQ96S42 347 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 SDF2Q99470 211 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 CGREF1Q99674 301 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 BARD1Q99728 777 aaKnown RBP19.03■□□□□ 0.64
CD44-222ENST00000526025 ZNF350Q9GZX5 532 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 HOXD1Q9GZZ0 328 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 METTL7AQ9H8H3 244 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 PROK2Q9HC23 129 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 HHATLQ9HCP6 504 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 DEPPQ9NTK1 212 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 KCNE3Q9Y6H6 103 aa19.03■□□□□ 0.64
CD44-222ENST00000526025 PRRC2CQ9Y520 2896 aaKnown RBP19.02■□□□□ 0.64
CD44-222ENST00000526025 LOC100653049A0A140TA62 436 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 EVPLLA8MZ36 301 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 NDUFAB1O14561 156 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 MRASO14807 208 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 ICOSLGO75144 302 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 KRT34O76011 436 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 CRYABP02511 175 aaKnown RBP19.02■□□□□ 0.64
CD44-222ENST00000526025 C1QCP02747 245 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 OR12D1P0DN82 309 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 GPX2P18283 190 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 ATP6V1C1P21283 382 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 EVI2BP34910 448 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 MEOX1P50221 254 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 RGNQ15493 299 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 HYAL4Q2M3T9 481 aa19.02■□□□□ 0.64
CD44-222ENST00000526025 RUNDC3AQ59EK9 446 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms