RNA–Protein interactions for RNA: ENST00000524141.5

SPIDR-225, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 2,761 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-225	ENST00000524141	OR5D16	Q8NGK9	328 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	MS4A8	Q9BY19	250 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ACTR6	Q9GZN1	396 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ABCG4	Q9H172	646 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	IL21	Q9HBE4	155 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	LYAR	Q9NX58	379 aa	Known RBP	9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	SPG21	Q9NZD8	308 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	EMC3	Q9P0I2	261 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	SCP2D1	Q9UJQ7	156 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	MAB21L2	Q9Y586	359 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	INSL5	Q9Y5Q6	135 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	FKBP7	Q9Y680	259 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	MEIKIN	A0A087WXM9	373 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	TSPAN11	A1L157	253 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	HMGN1	P05114	100 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ELFN1	P0C7U0	828 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	DNASE1	P24855	282 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	FPR3	P25089	353 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	TRIM23	P36406	574 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	FLT3LG	P49771	235 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	POU6F2	P78424	691 aa	Predicted RBP	9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	POU4F3	Q15319	338 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	PGGHG	Q32M88	737 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	SFXN4	Q6P4A7	337 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	TMEM65	Q6PI78	240 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	DPPA4	Q7L190	304 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	NR2C2AP	Q86WQ0	139 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ADGRG3	Q86Y34	549 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	IFNL1	Q8IU54	200 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	TRAPPC5	Q8IUR0	188 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	NRSN1	Q8IZ57	195 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	TOMM5	Q8N4H5	51 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ACBD7	Q8N6N7	88 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	IGSF21	Q96ID5	467 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	AIF1L	Q9BQI0	150 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	VN1R3	Q9BXE9	311 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	KCNK12	Q9HB15	430 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	TRIM36	Q9NQ86	728 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	CTPS2	Q9NRF8	586 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ZNF275	Q9NSD4	429 aa	Predicted RBP	9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ZCCHC3	Q9NUD5	404 aa	Known RBP	9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	IL20	Q9NYY1	176 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	ZNF224	Q9NZL3	707 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	CNIH4	Q9P003	139 aa		9.63	□□□□□ -0.87
SPIDR-225	ENST00000524141	RTCA	O00442	366 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	HR	O43593	1189 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	LEFTY1	O75610	366 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	SCO1	O75880	301 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	EPPIN	O95925	133 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	TFPI	P10646	304 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	GNS	P15586	552 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	PAICS	P22234	425 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	EPHA4	P54764	986 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	PITPNA	Q00169	270 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	SLC30A6	Q6NXT4	461 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	RTL4	Q6ZR62	310 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	C16orf62	Q7Z3J2	963 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	TRMT11	Q7Z4G4	463 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	C17orf64	Q86WR6	236 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	TCEAL8	Q8IYN2	117 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	GPR135	Q8IZ08	494 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	FAM46A	Q96IP4	442 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	F2RL3	Q96RI0	385 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	DPCD	Q9BVM2	203 aa	Predicted RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	DPEP2	Q9H4A9	486 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	ERVMER34-1	Q9H9K5	563 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	PELI2	Q9HAT8	420 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	BABAM2	Q9NXR7	383 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	C5AR2	Q9P296	337 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	ADAM29	Q9UKF5	820 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	RASD1	Q9Y272	281 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	GPR171	O14626	319 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	SOX30	O94993	753 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	SOD2	P04179	222 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	CHRM4	P08173	479 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	SULT1A3	P0DMM9	295 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	SULT1A4	P0DMN0	295 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	PRKAR2A	P13861	404 aa	Known RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	TIMP2	P16035	220 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	UGT2B7	P16662	529 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	CXCL3	P19876	107 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	GABRR2	P28476	465 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	THBS2	P35442	1172 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	NNMT	P40261	264 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	OMP	P47874	163 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	MAP4K2	Q12851	820 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	CAMK2D	Q13557	499 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	RAB33A	Q14088	237 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	ZNF267	Q14586	743 aa	Predicted RBP	9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	TJAP1	Q5JTD0	557 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	LYPD4	Q6UWN0	246 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	B3GLCT	Q6Y288	498 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	TMEM64	Q6YI46	380 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	CRIPAK	Q8N1N5	446 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	GALNT11	Q8NCW6	608 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	OR2T33	Q8NG76	320 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	LHFPL5	Q8TAF8	219 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	RGMA	Q96B86	450 aa		9.62	□□□□□ -0.87
SPIDR-225	ENST00000524141	ERMAP	Q96PL5	475 aa	Predicted RBP	9.62	□□□□□ -0.87

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms