RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 OSTF1Q92882 214 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 FGF13Q92913 245 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 RFKQ969G6 155 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 ACTRT3Q9BYD9 372 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 RSPH9Q9H1X1 276 aaPredicted RBP10.37□□□□□ -0.75
HDAC9-228ENST00000524023 IL20Q9NYY1 176 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 CLCA2Q9UQC9 943 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 NTNG1Q9Y2I2 539 aa10.37□□□□□ -0.75
HDAC9-228ENST00000524023 CCDC182A6NF36 153 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 A8MV72 311 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 CASKO14936 926 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 FCMRO60667 390 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 KAT7O95251 611 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 THY1P04216 161 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 TRAPPC2P0DI81 140 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 TRAPPC2BP0DI82 140 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 GJA4P35212 333 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 PDX1P52945 283 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 HTRA3P83110 453 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF155Q12901 538 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 LTB4RQ15722 352 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 TBRG1Q3YBR2 411 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ZFP69Q49AA0 526 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 C2orf27AQ580R0 203 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 TMEM240Q5SV17 173 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 C6orf132Q5T0Z8 1188 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 PLEKHM3Q6ZWE6 761 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 VWA5B2Q8N398 1253 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ARIH2OSQ8N7S6 290 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 SLC35A4Q96G79 324 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 DCLRE1CQ96SD1 692 aaKnown RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF649Q9BS31 505 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 KLHL28Q9NXS3 571 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 MOSPD1Q9UJG1 213 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 STON1Q9Y6Q2 735 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF780BQ9Y6R6 833 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 FAM172BPA6NC97 362 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 B4DXG7 233 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 C5orf67F2Z3F1 127 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 PLA2G10O15496 165 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 KLF4O43474 513 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ASGR2P07307 311 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 CMPK1P30085 196 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 SSTR4P31391 388 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 GPR4P46093 362 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 RGS8P57771 180 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ERVK-21P61565 698 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 PPP3R1P63098 170 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 MADCAM1Q13477 382 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 COL9A2Q14055 689 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 DSG2Q14126 1118 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 RPE65Q16518 533 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 TMEM44Q2T9K0 475 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF425Q6IV72 752 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 GDF7Q7Z4P5 450 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ADGRD2Q7Z7M1 963 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 NRROSQ86YC3 692 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 NRMQ8IXM6 262 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ATP6V1C2Q8NEY4 427 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 ADAMTS15Q8TE58 950 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 MCHR1Q99705 422 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 TEX12Q9BXU0 123 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 C6orf106Q9H6K1 298 aaPredicted RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 RMI1Q9H9A7 625 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 COMMD3Q9UBI1 195 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 PRKAG2Q9UGJ0 569 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 EXOGQ9Y2C4 368 aaKnown RBP10.36□□□□□ -0.75
HDAC9-228ENST00000524023 SLC17A4Q9Y2C5 497 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 RWDD3Q9Y3V2 267 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 GPSM3Q9Y4H4 160 aa10.36□□□□□ -0.75
HDAC9-228ENST00000524023 CENPXA8MT69 81 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 RFXAPO00287 272 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 PIP5K1CO60331 668 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 OR5F1O95221 314 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ADH1BP00325 375 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 C5AR1P21730 350 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 FCARP24071 287 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 APEX1P27695 318 aaKnown RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 KIR2DL3P43628 341 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 STXBP1P61764 594 aaKnown RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 BTN3A2P78410 334 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ACSM1Q08AH1 577 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 RUNX3Q13761 415 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 PGGHGQ32M88 737 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 TANGO2Q6ICL3 276 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 HEPHL1Q6MZM0 1159 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 FAM111BQ6SJ93 734 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 VITQ6UXI7 678 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 FRRS1Q6ZNA5 592 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 ZNF620Q6ZNG0 422 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 MBOAT2Q6ZWT7 520 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SLC16A11Q8NCK7 471 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 BBS1Q8NFJ9 593 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 TMEM255BQ8WV15 326 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 JPH3Q8WXH2 748 aaPredicted RBP10.35□□□□□ -0.75
HDAC9-228ENST00000524023 BADQ92934 168 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 CHFRQ96EP1 664 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 SLC41A3Q96GZ6 507 aa10.35□□□□□ -0.75
HDAC9-228ENST00000524023 DMRTB1Q96MA1 342 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms