RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ATP6AP1Q15904 470 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF77Q15935 545 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 IMPG1Q17R60 797 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 EXOC3L4Q17RC7 722 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PGS1Q32NB8 556 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 EML3Q32P44 896 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PTPN20Q4JDL3 420 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 XKR6Q5GH73 641 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 FGD3Q5JSP0 725 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 C9orf152Q5JTZ5 239 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF14Q5SWL7 426 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PLEKHS1Q5SXH7 462 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OGFRL1Q5TC84 451 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF5Q5TYX0 476 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 C9orf135Q5VTT2 229 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF9Q5VWM5 478 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PRAMEF6Q5VXH4 476 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PLCXD3Q63HM9 321 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 LAIR1Q6GTX8 287 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 HSDL2Q6YN16 418 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 GK5Q6ZS86 529 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ARCQ7LC44 396 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 LYSMD3Q7Z3D4 306 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SLC22A16Q86VW1 577 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 COMMD7Q86VX2 200 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 UNC93AQ86WB7 457 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 VRK2Q86Y07 508 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 MTURNQ8N3F0 131 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 FBXO39Q8N4B4 442 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ATPAF2Q8N5M1 289 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CCDC71LQ8N9Z2 235 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 FAM47BQ8NA70 645 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SUMF1Q8NBK3 374 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 B3GALNT2Q8NCR0 500 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OR4K14Q8NGD5 310 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OR6M1Q8NGM8 313 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OR13F1Q8NGS4 319 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OR2L2Q8NH16 312 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PPP1R35Q8TAP8 253 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 DEDD2Q8WXF8 326 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 LRTOMTQ8WZ04 291 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 UBE2FQ969M7 185 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 OTULINQ96BN8 352 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SMARCD1Q96GM5 515 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PCED1BQ96HM7 432 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 NARS2Q96I59 477 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 C7orf50Q9BRJ6 194 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 TLR10Q9BXR5 811 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CADM1Q9BY67 442 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 RTN4RQ9BZR6 473 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ZDHHC5Q9C0B5 715 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 NT5DC2Q9H857 520 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 ZNF430Q9H8G1 570 aaPredicted RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SMURF2Q9HAU4 748 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 BCO1Q9HAY6 547 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 MBNL1Q9NR56 388 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 TMLHEQ9NVH6 421 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 TAS2R9Q9NYW1 312 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 METTL1Q9UBP6 276 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 TUBD1Q9UJT1 453 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CLEC4EQ9ULY5 219 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SCML1Q9UN30 329 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 CYP8B1Q9UNU6 501 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PLEKHA6Q9Y2H5 1048 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 SLC27A6Q9Y2P4 619 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 LYVE1Q9Y5Y7 322 aa7.09□□□□□ -1.27
HDAC3-216ENST00000523088 MRPS18BQ9Y676 258 aaKnown RBP7.09□□□□□ -1.27
HDAC3-216ENST00000523088 PTPRJQ12913 1337 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TRAV25A0A0B4J276 109 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 A0A1B0GUH1 482 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TCRBV21S2A2A0A5A6 115 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 B2RBV5 119 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 MCIDASD6RGH6 385 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TSTD3H0UI37 97 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 H3BMQ9 156 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 J3QRK9 145 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CLIC2O15247 247 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 PRPF4O43172 522 aaKnown RBP eCLIP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CHST10O43529 356 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TLX3O43711 291 aaPredicted RBP7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DNAJA2O60884 412 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 GLRA3O75311 464 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ACSL3O95573 720 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 IFNA7P01567 189 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 NR3C1P04150 777 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 T-ENOLP0DO92 83 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ITGAMP11215 1152 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ATP6V1B2P21281 511 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 TACR2P21452 398 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 S1PR1P21453 382 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ITGA3P26006 1051 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 NDUFS1P28331 727 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DDTP30046 118 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CASRP41180 1078 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 ASPAP45381 313 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 GZMKP49863 264 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 CCR6P51684 374 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 RAB25P57735 213 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DEFA1P59665 94 aa7.08□□□□□ -1.28
HDAC3-216ENST00000523088 DEFA3P59666 94 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms