RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 C17orf105B2RV13 164 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 E5RI56 91 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 H0Y3Z8 333 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 H3BMM5 538 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 HS3ST1O14792 307 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 RCBTB2O95199 551 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 VAPBO95292 243 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ETHE1O95571 254 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ACSL3O95573 720 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 IGHV4-39P01824 125 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 C1QAP02745 245 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 HPNP05981 417 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ADH4P08319 380 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CYP4B1P13584 511 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 NPPBP16860 134 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 HNRNPH1P31943 449 aaKnown RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CTNNA1P35221 906 aaKnown RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CDKN1AP38936 164 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CD79BP40259 229 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CCR8P51685 355 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 DIO3P55073 304 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 HSD17B7P56937 341 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 RPS7P62081 194 aaKnown RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 RPS4XP62701 263 aaKnown RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 BTN3A2P78410 334 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 REEP5Q00765 189 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ID2Q02363 134 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 NAE1Q13564 534 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 RCAN2Q14206 197 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 HLXQ14774 488 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 PHKG1Q16816 387 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 PIGGQ5H8A4 983 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 NHSL2Q5HYW2 709 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 UBAP2Q5T6F2 1119 aaKnown RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 C11orf63Q6NUN7 778 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 NIPAL1Q6NVV3 410 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 BHLHB9Q6PI77 547 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 AGTRAPQ6RW13 159 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ZNF474Q6S9Z5 364 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 LCTLQ6UWM7 567 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CES3Q6UWW8 571 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 TMEM64Q6YI46 380 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CYHR1Q6ZMK1 362 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ZNF627Q7L945 461 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 KIAA1328Q86T90 577 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 MEX3DQ86XN8 651 aaKnown RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CPNE9Q8IYJ1 553 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 MORN4Q8NDC4 146 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 OR4K1Q8NGD4 311 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 OR8K3Q8NH51 312 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 OR14A16Q8NHC5 309 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 CD200R1Q8TD46 325 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ZNF721Q8TF20 911 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ASB10Q8WXI3 467 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 LRTOMTQ8WZ04 291 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 PEX13Q92968 403 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 ABTB1Q969K4 478 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 NEIL2Q969S2 332 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 RILPQ96NA2 401 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 TSNARE1Q96NA8 513 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 FAM111AQ96PZ2 611 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 BEX2Q9BXY8 128 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 PCBD2Q9H0N5 130 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 OPN3Q9H1Y3 402 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 LAMP3Q9UQV4 416 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 PDE10AQ9Y233 779 aa5.69□□□□□ -1.5
VPS13B-211ENST00000522802 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.69□□□□□ -1.5
VPS13B-211ENST00000522802 IGHV4-30-2A0A087WSY4 118 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 M0QYG6 137 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 OVOL3O00110 214 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 CYR61O00622 381 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 PSMD3O43242 534 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 ZBTB14O43829 449 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 LDB3O75112 727 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 TGM6O95932 706 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 SOD3P08294 240 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 MPC1LP0DKB6 136 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 EGR1P18146 543 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 SRD5A1P18405 259 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 SAT1P21673 171 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 GATA3P23771 443 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 IGFBP5P24593 272 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 CERS1P27544 350 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 GNALP38405 381 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 HADHBP55084 474 aaKnown RBP5.68□□□□□ -1.5
VPS13B-211ENST00000522802 CASP9P55211 416 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 RAB38P57729 211 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 SRYQ05066 204 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 CTBP1Q13363 440 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 TOMM20Q15388 145 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 ETFDHQ16134 617 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 MPEG1Q2M385 716 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 TMEM249Q2WGJ8 235 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 CD300EQ496F6 205 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-211ENST00000522802 PDLIM3Q53GG5 364 aaPredicted RBP5.68□□□□□ -1.5
VPS13B-211ENST00000522802 MRNIPQ6NTE8 343 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 ZNF549Q6P9A3 640 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 DGAT2L6Q6ZPD8 337 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 CENPUQ71F23 418 aa5.68□□□□□ -1.5
VPS13B-211ENST00000522802 YRDCQ86U90 279 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms