RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 ZCCHC3Q9NUD5 404 aaKnown RBP18.85■□□□□ 0.61
TRIM35-203ENST00000521253 ACAD8Q9UKU7 415 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 MAPRE3Q9UPY8 281 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 WIF1Q9Y5W5 379 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 SNX8Q9Y5X2 465 aa18.85■□□□□ 0.61
TRIM35-203ENST00000521253 NBPF19A0A087WUL8 3843 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 TRPC5OSA6NMA1 111 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 ANKRD28O15084 1053 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 NKX2-2O95096 273 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 IL33O95760 270 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 ACP2P11117 423 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 RFX3P48380 749 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 GAS1P54826 345 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 LSM12Q3MHD2 195 aaKnown RBP18.84■□□□□ 0.61
TRIM35-203ENST00000521253 VPS26BQ4G0F5 336 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 GOLGA6L1Q8N7Z2 621 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 SLC16A11Q8NCK7 471 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 PHF10Q8WUB8 498 aaKnown RBP18.84■□□□□ 0.61
TRIM35-203ENST00000521253 SLC9A6Q92581 669 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 RMND5BQ96G75 393 aaPredicted RBP18.84■□□□□ 0.61
TRIM35-203ENST00000521253 DPY30Q9C005 99 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 SERHLQ9NQF3 203 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 FLRT3Q9NZU0 649 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 MRTO4Q9UKD2 239 aaKnown RBP18.84■□□□□ 0.61
TRIM35-203ENST00000521253 PCNX1Q96RV3 2341 aa18.84■□□□□ 0.61
TRIM35-203ENST00000521253 GOLGA8QA0A0J9YX86 632 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 GOLGA8OA6NCC3 632 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 GOLGA8NF8WBI6 632 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 SLCO1B7G3V0H7 640 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 KCNH1O95259 989 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 IGKV1D-16P01601 117 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 ALDOCP09972 364 aaKnown RBP18.83■□□□□ 0.6
TRIM35-203ENST00000521253 COL8A1P27658 744 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 EPHA3P29320 983 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 EVI2BP34910 448 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 CCT3P49368 545 aaKnown RBP18.83■□□□□ 0.6
TRIM35-203ENST00000521253 SMSP52788 366 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 TOMM20Q15388 145 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 DUSP5Q16690 384 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 EXOSC6Q5RKV6 272 aaKnown RBP18.83■□□□□ 0.6
TRIM35-203ENST00000521253 OR4F3Q6IEY1 312 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 ZNF585AQ6P3V2 769 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 ZCCHC12Q6PEW1 402 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 RPRMLQ8N4K4 120 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 MARVELD2Q8N4S9 558 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 OTUB1Q96FW1 271 aaPredicted RBP18.83■□□□□ 0.6
TRIM35-203ENST00000521253 YIPF4Q9BSR8 244 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 NEUROD4Q9HD90 331 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 CENPEQ02224 2701 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 UNC79Q9P2D8 2635 aa18.83■□□□□ 0.6
TRIM35-203ENST00000521253 NCKAP5O14513 1909 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 CFLARO15519 480 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 FADS1O60427 444 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 CBR3O75828 277 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 HMGN2P05204 90 aaKnown RBP18.82■□□□□ 0.6
TRIM35-203ENST00000521253 PRIM2P49643 509 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 PSMD4P55036 377 aaKnown RBP18.82■□□□□ 0.6
TRIM35-203ENST00000521253 WNT3P56703 355 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 HBA1P69905 142 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 LASP1Q14847 261 aaKnown RBP18.82■□□□□ 0.6
TRIM35-203ENST00000521253 SPDYE7PQ495Y7 208 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 EIPR1Q53HC9 387 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 WLSQ5T9L3 541 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 OR5M10Q6IEU7 315 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 MAVSQ7Z434 540 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 GALNT10Q86SR1 603 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 PLCZ1Q86YW0 608 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 CLECL1Q8IZS7 167 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 FAM83FQ8NEG4 500 aaPredicted RBP18.82■□□□□ 0.6
TRIM35-203ENST00000521253 OR8J2Q8NGG1 315 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 OR56A1Q8NGH5 318 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 JADE3Q92613 823 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 AIG1Q9NVV5 245 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 SLC6A5Q9Y345 797 aa18.82■□□□□ 0.6
TRIM35-203ENST00000521253 C15orf38-AP3S2A0A0A6YYH1 394 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 FIGNL2A6NMB9 653 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 CYSRT1A8MQ03 144 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 C17orf51A8MQB3 221 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 HMGB1P1B2RPK0 211 aaPredicted RBP18.81■□□□□ 0.6
TRIM35-203ENST00000521253 B4DXG7 233 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 SCO2O43819 266 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 SASH3O75995 380 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 ALOX5P09917 674 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 AGAP20933 346 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 ACVR2AP27037 513 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 KIR3DL1P43629 444 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 NME5P56597 212 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 TP53BP2Q13625 1128 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 SLC9B1Q4ZJI4 515 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 WIPI1Q5MNZ9 446 aaPredicted RBP18.81■□□□□ 0.6
TRIM35-203ENST00000521253 XKRXQ6PP77 449 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 SPATA19Q7Z5L4 167 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 YRDCQ86U90 279 aaKnown RBP18.81■□□□□ 0.6
TRIM35-203ENST00000521253 PIWIL2Q8TC59 973 aaKnown RBP18.81■□□□□ 0.6
TRIM35-203ENST00000521253 SFXN5Q8TD22 340 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 TESCQ96BS2 214 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 GPATCH2Q9NW75 528 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 FAM120CQ9NX05 1096 aaKnown RBP18.81■□□□□ 0.6
TRIM35-203ENST00000521253 FBXL2Q9UKC9 423 aa18.81■□□□□ 0.6
TRIM35-203ENST00000521253 ABCG2Q9UNQ0 655 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms