RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 RNF32Q9H0A6 362 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.12□□□□□ -0.15
LSM1-203ENST00000520755 PIF1Q9H611 641 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 GIN1Q9NXP7 522 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 CD300AQ9UGN4 299 aa14.12□□□□□ -0.15
LSM1-203ENST00000520755 BSNQ9UPA5 3926 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 A8MVJ9 347 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 TO15178 435 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 GYG2O15488 501 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 PDE5AO76074 875 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 OR6B1O95007 311 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 DRD5P21918 477 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 GABRA3P34903 492 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 TRHRP34981 398 aaPredicted RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 CD96P40200 585 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 SOX3P41225 446 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 CYB561P49447 251 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 TXNL4AP83876 142 aaKnown RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 CYP51A1Q16850 503 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 NADK2Q4G0N4 442 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 CCNJQ5T5M9 372 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 LYPD8Q6UX82 237 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 ZAR1Q86SH2 424 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 SLC44A2Q8IWA5 706 aaPredicted RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 TAGAPQ8N103 731 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 COX18Q8N8Q8 333 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 ANKFN1Q8N957 763 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 TEX19Q8NA77 164 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 LSM14AQ8ND56 463 aaKnown RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 FAM156AQ8NDB6 213 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 GPR151Q8TDV0 419 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 ADAMTS15Q8TE58 950 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 HAS2Q92819 552 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 TP53INP1Q96A56 240 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 RMND5BQ96G75 393 aaPredicted RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 SH3GL1Q99961 368 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 ALG2Q9H553 416 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 RUBCNLQ9H714 662 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 A4GALTQ9NPC4 353 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 FBXO34Q9NWN3 711 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 ADA2Q9NZK5 511 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 LUZP4Q9P127 313 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 LRFN1Q9P244 771 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 PRPF19Q9UMS4 504 aaKnown RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 L3MBTL1Q9Y468 752 aa14.11□□□□□ -0.15
LSM1-203ENST00000520755 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.11□□□□□ -0.15
LSM1-203ENST00000520755 TTC36A6NLP5 189 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 GSC2O15499 205 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 DNAJC8O75937 253 aaPredicted RBP14.1□□□□□ -0.15
LSM1-203ENST00000520755 KCNK2O95069 426 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 BCHEP06276 602 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 CHRM4P08173 479 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 TFPTP0C1Z6 253 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 HSD17B1P14061 328 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 TNFSF10P50591 281 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 HLCSP50747 726 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 NRG3P56975 720 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 DCAF7P61962 342 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 NFATC3Q12968 1075 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 OR1C1Q15619 314 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 ZNHIT3Q15649 155 aaPredicted RBP14.1□□□□□ -0.15
LSM1-203ENST00000520755 SYPL1Q16563 259 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 FXNQ16595 210 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 SAMD4BQ5PRF9 694 aaKnown RBP14.1□□□□□ -0.15
LSM1-203ENST00000520755 DCST2Q5T1A1 773 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 SPINK14Q6IE38 97 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 PGM2L1Q6PCE3 622 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 OPN5Q6U736 354 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 IL20RBQ6UXL0 311 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 GALNT10Q86SR1 603 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 IFNEQ86WN2 208 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 PRR22Q8IZ63 422 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 CYP4Z2PQ8N1L4 340 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 CHDHQ8NE62 594 aaPredicted RBP14.1□□□□□ -0.15
LSM1-203ENST00000520755 FAM110BQ8TC76 370 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 SLC38A5Q8WUX1 472 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 XAGE5Q8WWM1 108 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 UTP4Q969X6 686 aaKnown RBP14.1□□□□□ -0.15
LSM1-203ENST00000520755 TMEM19Q96HH6 336 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 REXO5Q96IC2 774 aaKnown RBP14.1□□□□□ -0.15
LSM1-203ENST00000520755 SIGLEC12Q96PQ1 595 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 ECSITQ9BQ95 431 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 THTPAQ9BU02 230 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 TMEM38AQ9H6F2 299 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 Q9N2J8 555 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 HPF1Q9NWY4 346 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 NINQ8N4C6 2090 aa14.1□□□□□ -0.15
LSM1-203ENST00000520755 ABCD3P28288 659 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 PCGF2P35227 344 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 PIGAP37287 484 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 RASSF2P50749 326 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 POU6F2P78424 691 aaPredicted RBP14.09□□□□□ -0.15
LSM1-203ENST00000520755 MRPS22P82650 360 aaKnown RBP14.09□□□□□ -0.15
LSM1-203ENST00000520755 KLRB1Q12918 225 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 VMACQ2NL98 169 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 ARHGAP11BQ3KRB8 267 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 RPS26P11Q5JNZ5 115 aaPredicted RBP14.09□□□□□ -0.15
LSM1-203ENST00000520755 SLC6A19Q695T7 634 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 DESI1Q6ICB0 168 aa14.09□□□□□ -0.15
LSM1-203ENST00000520755 FIGNL1Q6PIW4 674 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms