RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 HAT1O14929 419 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 RAMP1O60894 148 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 ETS1P14921 441 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 PTBP1P26599 531 aaKnown RBP eCLIP4.34□□□□□ -1.71
PTPN12-213ENST00000519553 ATP6V1E1P36543 226 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 PUDPQ08623 228 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 PKN2Q16513 984 aaKnown RBP4.34□□□□□ -1.71
PTPN12-213ENST00000519553 GLYR1Q49A26 553 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-213ENST00000519553 ZNF57Q68EA5 555 aaPredicted RBP4.34□□□□□ -1.71
PTPN12-213ENST00000519553 UFSP1Q6NVU6 142 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 VASH2Q86V25 355 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 ZNF677Q86XU0 584 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 C9orf40Q8IXQ3 194 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 MCHR2Q969V1 340 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 DUSP12Q9UNI6 340 aa4.34□□□□□ -1.71
PTPN12-213ENST00000519553 TNFSF11O14788 317 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 TGFAP01135 160 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 IGFBP1P08833 259 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-213ENST00000519553 H2AFZP0C0S5 128 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 PRKAR2BP31323 418 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 RABIFP47224 123 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 HTR5AP47898 357 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 SLC26A5P58743 744 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 GABPB1Q06547 395 aaPredicted RBP4.33□□□□□ -1.72
PTPN12-213ENST00000519553 CAMK4Q16566 473 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 CYBRD1Q53TN4 286 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 SLC39A4Q6P5W5 647 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 APOBEC3FQ8IUX4 373 aaKnown RBP4.33□□□□□ -1.72
PTPN12-213ENST00000519553 ART4Q93070 314 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 C19orf24Q9BVV8 132 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 TEX13BQ9BXU2 312 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 NINJ2Q9NZG7 142 aa4.33□□□□□ -1.72
PTPN12-213ENST00000519553 H3BTX0 84 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 SSX5O60225 188 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 SEC22BO75396 215 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 JCHAINP01591 159 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 TSPAN8P19075 237 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 AZU1P20160 251 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 ZBTB25P24278 435 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 GPC3P51654 580 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 ATXN3P54252 364 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-213ENST00000519553 UBE2V2Q15819 145 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 ZNF79Q15937 498 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 ISXQ2M1V0 245 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 MEDAGQ5VYS4 303 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 BTNL3Q6UXE8 466 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 ZNF619Q8N2I2 560 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 FAM71CQ8NEG0 241 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 CCDC47Q96A33 483 aaKnown RBP4.32□□□□□ -1.72
PTPN12-213ENST00000519553 C18orf25Q96B23 403 aaPredicted RBP4.32□□□□□ -1.72
PTPN12-213ENST00000519553 MRPL38Q96DV4 380 aaKnown RBP4.32□□□□□ -1.72
PTPN12-213ENST00000519553 KAT8Q9H7Z6 458 aaKnown RBP4.32□□□□□ -1.72
PTPN12-213ENST00000519553 TRPV5Q9NQA5 729 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 ABCB10Q9NRK6 738 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 SOHLH2Q9NX45 425 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 EHFQ9NZC4 300 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 TMEM9Q9P0T7 183 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 APOBEC3BQ9UH17 382 aaKnown RBP4.32□□□□□ -1.72
PTPN12-213ENST00000519553 CELA1Q9UNI1 258 aa4.32□□□□□ -1.72
PTPN12-213ENST00000519553 GRIN2DO15399 1336 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 IGLV8-61A0A075B6I0 122 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 RNF103-CHMP3A0A140T963 221 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 EPOPA6NHQ4 379 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 LGALS8O00214 317 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 PDXKO00764 312 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 PPIHO43447 177 aaKnown RBP4.31□□□□□ -1.72
PTPN12-213ENST00000519553 NOL4O94818 638 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 PRKCEQ02156 737 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 TFDP1Q14186 410 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 CDKN3Q16667 212 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 DCAF4L1Q3SXM0 396 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 VPS36Q86VN1 386 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 MCOLN2Q8IZK6 566 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 HDDC3Q8N4P3 179 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 ZNF564Q8TBZ8 553 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-213ENST00000519553 C14orf79Q96F83 325 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 MAPKAP1Q9BPZ7 522 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 TBC1D10AQ9BXI6 508 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 GPN2Q9H9Y4 310 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-213ENST00000519553 ROPN1Q9HAT0 212 aaPredicted RBP4.31□□□□□ -1.72
PTPN12-213ENST00000519553 KLHL21Q9UJP4 597 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 CA5BQ9Y2D0 317 aa4.31□□□□□ -1.72
PTPN12-213ENST00000519553 FUT1P19526 365 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 ZP3P21754 424 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 RGRP47804 291 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 PLOD1Q02809 727 aaPredicted RBP4.3□□□□□ -1.72
PTPN12-213ENST00000519553 KARSQ15046 597 aaKnown RBP4.3□□□□□ -1.72
PTPN12-213ENST00000519553 LDLRAP1Q5SW96 308 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 SLX4IPQ5VYV7 408 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 ZNF544Q6NX49 715 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 STAC2Q6ZMT1 411 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 Q7L0L9 218 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 HSD3B7Q9H2F3 369 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 IL17CQ9P0M4 197 aa4.3□□□□□ -1.72
PTPN12-213ENST00000519553 PIN4Q9Y237 131 aaKnown RBP4.3□□□□□ -1.72
PTPN12-213ENST00000519553 USP6P35125 1406 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 ZFP92A6NM28 416 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 HDAC3O15379 428 aa4.29□□□□□ -1.72
PTPN12-213ENST00000519553 RPA1P27694 616 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms