RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 QPCTLQ9NXS2 382 aa20.12■□□□□ 0.81
VEGFA-217ENST00000518538 UBR5O95071 2799 aaPredicted RBP20.12■□□□□ 0.81
VEGFA-217ENST00000518538 PRRC2CQ9Y520 2896 aaKnown RBP20.11■□□□□ 0.81
VEGFA-217ENST00000518538 CLEC18AA5D8T8 446 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 IGKV1D-16P01601 117 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 UQCRC2P22695 453 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 EVI2BP34910 448 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 RFX3P48380 749 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 IRX1P78414 480 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-217ENST00000518538 HSF1Q00613 529 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 CLEC18BQ6UXF7 455 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 C6orf120Q7Z4R8 191 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 FAM26EQ8N5C1 309 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 CLEC18CQ8NCF0 446 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 OR9I1Q8NGQ6 314 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 RFWD2Q8NHY2 731 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 FAM110BQ8TC76 370 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 OTUB1Q96FW1 271 aaPredicted RBP20.11■□□□□ 0.81
VEGFA-217ENST00000518538 CHMP6Q96FZ7 201 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 BTBD2Q9BX70 525 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 DCTN4Q9UJW0 460 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 ABCG2Q9UNQ0 655 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 ZNF835Q9Y2P0 537 aa20.11■□□□□ 0.81
VEGFA-217ENST00000518538 FAM234BA2RU67 622 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 SNPHO15079 494 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 SLC19A2O60779 497 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 PDE9AO76083 593 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 KCNK2O95069 426 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 IGHG3P01860 377 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 MAN2A2P49641 1150 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 POLR2JP52435 117 aaKnown RBP20.1■□□□□ 0.81
VEGFA-217ENST00000518538 POU6F2P78424 691 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-217ENST00000518538 SRSF1Q07955 248 aaKnown RBP eCLIP20.1■□□□□ 0.813e-8■■□□□ 13.8
VEGFA-217ENST00000518538 ESPL1Q14674 2120 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 SLC10A1Q14973 349 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.1■□□□□ 0.81
VEGFA-217ENST00000518538 TIGD3Q6B0B8 471 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 ARHGAP11AQ6P4F7 1023 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 ANGPTL8Q6UXH0 198 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 Q6ZPB1 254 aaPredicted RBP20.1■□□□□ 0.81
VEGFA-217ENST00000518538 MSANTD1Q6ZTZ1 278 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 SPPL2CQ8IUH8 684 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 CHERPQ8IWX8 916 aaKnown RBP20.1■□□□□ 0.81
VEGFA-217ENST00000518538 CLEC4FQ8N1N0 589 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 OR1J4Q8NGS1 313 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 ADAMTS15Q8TE58 950 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 CDS1Q92903 461 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 PANX1Q96RD7 426 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 C15orf41Q9Y2V0 281 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 WIF1Q9Y5W5 379 aa20.1■□□□□ 0.81
VEGFA-217ENST00000518538 SVILO95425 2214 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 GCN1Q92616 2671 aaKnown RBP20.09■□□□□ 0.81
VEGFA-217ENST00000518538 A0A1B0GTH9 108 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 DYNC1I1O14576 645 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 GNB5O14775 395 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 FADS1O60427 444 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 UTS2O95399 124 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 CELA3AP09093 270 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 GDF1P27539 372 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 LCN1P31025 176 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 MDH1P40925 334 aaKnown RBP20.09■□□□□ 0.81
VEGFA-217ENST00000518538 ATP4BP51164 291 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 SAXO2Q658L1 398 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 FIGNL1Q6PIW4 674 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 TRILQ7L0X0 811 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 FGD2Q7Z6J4 655 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 TRIML2Q8N7C3 387 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 SLC35G5Q96KT7 338 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 GNRHR2Q96P88 292 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 OR7D2Q96RA2 312 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 INPP5KQ9BT40 448 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 UBQLN3Q9H347 655 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 ACKR4Q9NPB9 350 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 FGFR1OP2Q9NVK5 253 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 FLRT3Q9NZU0 649 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 PCDHGB3Q9Y5G1 929 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 LIPGQ9Y5X9 500 aa20.09■□□□□ 0.81
VEGFA-217ENST00000518538 A0A0G2JND7 137 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 A0A1B0GVC2 190 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 C2orf72A6NCS6 295 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 VIMP08670 466 aaKnown RBP20.08■□□□□ 0.81
VEGFA-217ENST00000518538 TROVE2P10155 538 aaKnown RBP eCLIP20.08■□□□□ 0.81
VEGFA-217ENST00000518538 ABOP16442 354 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 MATN1P21941 496 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 PTPN6P29350 595 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 GAS1P54826 345 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 RPS26P62854 115 aaKnown RBP20.08■□□□□ 0.81
VEGFA-217ENST00000518538 C4orf17Q53FE4 359 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 WDSUB1Q8N9V3 476 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 MIPOL1Q8TD10 442 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 NEURL3Q96EH8 262 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 SLC35A5Q9BS91 424 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 G6PC3Q9BUM1 346 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 SERHL2Q9H4I8 314 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 RMND5AQ9H871 391 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 SERHLQ9NQF3 203 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 TMEM45AQ9NWC5 275 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 SLC5A6Q9Y289 635 aa20.08■□□□□ 0.81
VEGFA-217ENST00000518538 CCDC154A6NI56 674 aa20.07■□□□□ 0.8
VEGFA-217ENST00000518538 DUXAA6NLW8 204 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms