RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 PEX3P56589 373 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 RPL23AP62750 156 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 HMGN5P82970 282 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 DDX39BQ13838 428 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 GANABQ14697 944 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 C17orf58Q2M2W7 97 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 RABL6Q3YEC7 729 aaPredicted RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 BOLA3Q53S33 107 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 BEND6Q5SZJ8 279 aaPredicted RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 TMEM225Q6GV28 225 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 PRR5LQ6MZQ0 368 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 FAAP20Q6NZ36 180 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 BTNL3Q6UXE8 466 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 NLRP9Q7RTR0 991 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 HSD11B1LQ7Z5J1 315 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 TSEN54Q7Z6J9 526 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 RPAINQ86UA6 219 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 CCDC71Q8IV32 467 aaPredicted RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 C15orf54Q8N8G6 183 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 AQP11Q8NBQ7 271 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 PNPT1Q8TCS8 783 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 C7orf34Q96L11 122 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 TTC25Q96NG3 672 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 HSD17B14Q9BPX1 270 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 CABLES2Q9BTV7 478 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 EDEM2Q9BV94 578 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 DUSP16Q9BY84 665 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 PUS3Q9BZE2 481 aaKnown RBP2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 SP140LQ9H930 580 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 UFSP2Q9NUQ7 469 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 SENP1Q9P0U3 644 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 ASIC3Q9UHC3 531 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 BAIAP2L1Q9UHR4 511 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 CRLS1Q9UJA2 301 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 WDR45Q9Y484 360 aa2.72□□□□□ -1.97
RNU6-840P-201ENST00000517275 IGLV7-46A0A075B6I9 117 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 IGHV3OR16-10A0A075B7F0 116 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 IGHV3-16A0A0C4DH30 117 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 A0A0J9YVX5 310 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 XKRY2A2RUG3 117 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 KRTAP29-1A8MX34 341 aaPredicted RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 NPIPA7E9PJI5 369 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ARPC3O15145 178 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ARHGEF9O43307 516 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TYROBPO43914 113 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 STX11O75558 287 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TM7SF2O76062 418 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 B3GAT3O94766 335 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 NUDT14O95848 222 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 JCHAINP01591 159 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TPM2P07951 284 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 GSTT2P0CG29 244 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 GSTT2BP0CG30 244 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TRIM49P0CI25 452 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TRIM49CP0CI26 452 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 NPIPA8P0DM63 369 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 SFTPCP11686 197 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 HNF1AP20823 631 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 GRIA1P42261 906 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 DHPSP49366 369 aaPredicted RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 CEBPDP49716 269 aaPredicted RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 RIDAP52758 137 aaKnown RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 PLA2G16P53816 162 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 RPS6P62753 249 aaKnown RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TNFRSF17Q02223 184 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 MAP2K1Q02750 393 aaPredicted RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ZNF33BQ06732 778 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 RIPPLY1Q0D2K3 151 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 PJVKQ0ZLH3 352 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 SIX1Q15475 284 aaPredicted RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 SYPL1Q16563 259 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 PVRIGQ6DKI7 326 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ZYG11AQ6WRX3 759 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 Q7L0L9 218 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 LRRTM1Q86UE6 522 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 RNF130Q86XS8 419 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ARL14Q8N4G2 192 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 BHLHE23Q8NDY6 225 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 PIGCQ92535 297 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ART4Q93070 314 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TUBGCP3Q96CW5 907 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 DHTKD1Q96HY7 919 aaPredicted RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 PIWIL1Q96J94 861 aaKnown RBP2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ELMO2Q96JJ3 720 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ART5Q96L15 291 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 NPY6RQ99463 290 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 RIT2Q99578 217 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 BARHL1Q9BZE3 327 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 LIME1Q9H400 295 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TUBB1Q9H4B7 451 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 FN3KRPQ9HA64 309 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ELOVL3Q9HB03 270 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 IL1RL2Q9HB29 575 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 TM9SF3Q9HD45 589 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 ESM1Q9NQ30 184 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 NMRK1Q9NWW6 199 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 EHFQ9NZC4 300 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 CTSZQ9UBR2 303 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 NPIPA1Q9UND3 350 aa2.71□□□□□ -1.98
RNU6-840P-201ENST00000517275 RPH3ALQ9UNE2 315 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms