RNA–Protein interactions for RNA: ENST00000515838.2

RBM4-209, Transcript of RNA binding motif protein 4, human

TSL 2

Gene RBM4, Length 943 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM4-209	ENST00000515838	MKS1	Q9NXB0	559 aa		13.56	□□□□□ -0.24
RBM4-209	ENST00000515838	CRIM1	Q9NZV1	1036 aa		13.56	□□□□□ -0.24
RBM4-209	ENST00000515838	TMED5	Q9Y3A6	229 aa		13.56	□□□□□ -0.24
RBM4-209	ENST00000515838		A0A1W2PPM1	405 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	TBX19	O60806	448 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	JUN	P05412	331 aa	Known RBP	13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	EPX	P11678	715 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	PEPD	P12955	493 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	ZNF708	P17019	499 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	KRT4	P19013	534 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	DPP4	P27487	766 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	MC3R	P41968	323 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	GAS1	P54826	345 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	DIO3	P55073	304 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	FOXA1	P55317	472 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	OCRL	Q01968	901 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	GLYR1	Q49A26	553 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	CHDH	Q8NE62	594 aa	Predicted RBP	13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	CDC26	Q8NHZ8	85 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	ELP4	Q96EB1	424 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	AMDHD1	Q96NU7	426 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	TUBA1C	Q9BQE3	449 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	LMF2	Q9BU23	707 aa	Known RBP	13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	C1orf109	Q9NX04	203 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	PPP4R1L	Q9P1A2	415 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	CLCF1	Q9UBD9	225 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	STOML1	Q9UBI4	398 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	CBLC	Q9ULV8	474 aa		13.55	□□□□□ -0.24
RBM4-209	ENST00000515838	EEF1E1-BLOC1S5	C9J1V9	151 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	UPK1A	O00322	258 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	EEF1E1	O43324	174 aa	Known RBP	13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	HCRTR2	O43614	444 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	SEC22B	O75396	215 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	KCNH1	O95259	989 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	LHX2	P50458	406 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	ART1	P52961	327 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	SLC18A2	Q05940	514 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	FGFBP1	Q14512	234 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	DESI1	Q6ICB0	168 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	TMEM107	Q6UX40	140 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	CHMP1B	Q7LBR1	199 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	CAMKMT	Q7Z624	323 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	FADS6	Q8N9I5	356 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	C9orf106	Q8NAJ2	232 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	CEP70	Q8NHQ1	597 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	EFHD2	Q96C19	240 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	MTERF3	Q96E29	417 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	FCRL1	Q96LA6	429 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	CXXC4	Q9H2H0	198 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	GLIPR2	Q9H4G4	154 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	LRTM1	Q9HBL6	345 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	ST6GALNAC2	Q9UJ37	374 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	CCL27	Q9Y4X3	112 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	POLR3H	Q9Y535	204 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	KIAA1549	Q9HCM3	1950 aa		13.54	□□□□□ -0.24
RBM4-209	ENST00000515838	C2orf72	A6NCS6	295 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	CLCA1	A8K7I4	914 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	AZIN1	O14977	448 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	PDPK1	O15530	556 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	FADS1	O60427	444 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	TRIM13	O60858	407 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	HSPA4L	O95757	839 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	IL33	O95760	270 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	DNASE1	P24855	282 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	TACR1	P25103	407 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	LCN1	P31025	176 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	RPL3	P39023	403 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	ASMT	P46597	345 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	CLDN18	P56856	261 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	KIAA0040	Q15053	153 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	GRAMD2A	Q8IUY3	354 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	MEIOB	Q8N635	442 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	DACH2	Q96NX9	599 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	GPATCH1	Q9BRR8	931 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	ANKRA2	Q9H9E1	313 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	L2HGDH	Q9H9P8	463 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	EML4	Q9HC35	981 aa	Known RBP	13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	FBXL2	Q9UKC9	423 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	PACSIN3	Q9UKS6	424 aa		13.53	□□□□□ -0.24
RBM4-209	ENST00000515838	PRRC2A	P48634	2157 aa	Known RBP	13.52	□□□□□ -0.24
RBM4-209	ENST00000515838	IGLV3-32	A0A0A0MS00	114 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	KDM4E	B2RXH2	506 aa	Predicted RBP	13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	MSTN	O14793	375 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	ZIC3	O60481	467 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	SOX30	O94993	753 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	SHBG	P04278	402 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	NGFR	P08138	427 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	FGF4	P08620	206 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	PRPS2	P11908	318 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	SERPINB5	P36952	375 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	SLCO1A2	P46721	670 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	CPA2	P48052	419 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	WNT3	P56703	355 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	SRY	Q05066	204 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	C17orf67	Q0P5P2	114 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	SH2D4B	Q5SQS7	431 aa		13.52	□□□□□ -0.25
RBM4-209	ENST00000515838	ZCCHC12	Q6PEW1	402 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms