RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 ZBED6CLQ96FA7 236 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 EGLN2Q96KS0 407 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 ZFP3Q96NJ6 502 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 TSSK3Q96PN8 268 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 FAM111AQ96PZ2 611 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 CCT7Q99832 543 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 ROPN1BQ9BZX4 212 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 DSN1Q9H410 356 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 REEP4Q9H6H4 257 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 PTGES2Q9H7Z7 377 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 ANKZF1Q9H8Y5 726 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 ROPN1Q9HAT0 212 aaPredicted RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 DNAJB12Q9NXW2 375 aaKnown RBP12.41□□□□□ -0.42
TCOF1-215ENST00000515516 TRAF6Q9Y4K3 522 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 CCL27Q9Y4X3 112 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 PTGDR2Q9Y5Y4 395 aa12.41□□□□□ -0.42
TCOF1-215ENST00000515516 CLCA1A8K7I4 914 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 TMEM114B3SHH9 223 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 SPAG7O75391 227 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 IL33O95760 270 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 NUDT17P0C025 328 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 HK1P19367 917 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 MAPK1P28482 360 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 ALDH3A1P30838 453 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 ASMTP46597 345 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 STARP49675 285 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 GAS1P54826 345 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 GFRA1P56159 465 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 EEFSECP57772 596 aaKnown RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 RPL38P63173 70 aaKnown RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 STX5Q13190 355 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 GANABQ14697 944 aaKnown RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 BCL2A1Q16548 175 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 FLYWCH1Q4VC44 716 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 FBXW10Q5XX13 1052 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 KANK2Q63ZY3 851 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 ANKRD26P1Q6NSI1 321 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 Q6ZSR9 355 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 ZNF551Q7Z340 670 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 SZRD1Q7Z422 152 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 P4HA3Q7Z4N8 544 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 TRABD2AQ86V40 505 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 GRAMD2AQ8IUY3 354 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 C9orf106Q8NAJ2 232 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 GOT1L1Q8NHS2 421 aaPredicted RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 GPR151Q8TDV0 419 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 SH3GL2Q99962 352 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 LMF2Q9BU23 707 aaKnown RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 SFXN3Q9BWM7 321 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 POLDIP3Q9BY77 421 aaKnown RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 TBL1XR1Q9BZK7 514 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 HHATLQ9HCP6 504 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 EQTNQ9NQ60 294 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 FAM120CQ9NX05 1096 aaKnown RBP12.4□□□□□ -0.42
TCOF1-215ENST00000515516 CRIM1Q9NZV1 1036 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 DNAJC15Q9Y5T4 150 aa12.4□□□□□ -0.42
TCOF1-215ENST00000515516 FBN2P35556 2912 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 TUBAL3A6NHL2 446 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 ZIC3O60481 467 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 TBX19O60806 448 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 CTAG2O75638 210 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 RCBTB2O95199 551 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 PSMG1O95456 288 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 FGF4P08620 206 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 PEPDP12955 493 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 SDC1P18827 310 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 POU3F2P20265 443 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 SERPINB5P36952 375 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 HPCAL1P37235 193 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 RPL3P39023 403 aaKnown RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 CPA2P48052 419 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 LHX2P50458 406 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 DIO3P55073 304 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 VSNL1P62760 191 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 RFTN2Q52LD8 501 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 ARL13AQ5H913 290 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 RAET1LQ5VY80 246 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 EMBQ6PCB8 327 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 LRIG3Q6UXM1 1119 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 MEIOBQ8N635 442 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 CDRT4Q8N9R6 151 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 NUP43Q8NFH3 380 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 OR2M3Q8NG83 312 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 OR2T11Q8NH01 316 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 DUSP19Q8WTR2 217 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 RNF138Q8WVD3 245 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 TWIST2Q8WVJ9 160 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 SLC9A6Q92581 669 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 CIDECQ96AQ7 238 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 INTS12Q96CB8 462 aaKnown RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 MTERF3Q96E29 417 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 ZNF764Q96H86 408 aaPredicted RBP12.39□□□□□ -0.43
TCOF1-215ENST00000515516 PPP3R2Q96LZ3 170 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 UCN2Q96RP3 112 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 MED11Q9P086 117 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 BAIAP2L1Q9UHR4 511 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 LGALS13Q9UHV8 139 aa12.39□□□□□ -0.43
TCOF1-215ENST00000515516 DNAJC13O75165 2243 aa12.38□□□□□ -0.43
TCOF1-215ENST00000515516 CACNA1CQ13936 2221 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms