RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 CPPED1Q9BRF8 314 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SLC39A3Q9BRY0 314 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 ITPAQ9BY32 194 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 MMADHCQ9H3L0 296 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TMEM38AQ9H6F2 299 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TRIM45Q9H8W5 580 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 MTHFD2LQ9H903 347 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 HHATLQ9HCP6 504 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 TMEM181Q9P2C4 612 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF223Q9UK11 482 aaPredicted RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 PRPF19Q9UMS4 504 aaKnown RBP9.38□□□□□ -0.91
NEDD9-214ENST00000513989 NPFFR2Q9Y5X5 522 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 HIVEP3Q5T1R4 2406 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 SHANK1Q9Y566 2161 aa9.38□□□□□ -0.91
NEDD9-214ENST00000513989 A8MVJ9 347 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 HMGN4O00479 90 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 IL33O95760 270 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 IFNA14P01570 189 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 CELA2AP08217 269 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 GUSBP08236 651 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ETFAP13804 333 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 HPGDP15428 266 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 HOXB9P17482 250 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ENDOUP21128 410 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ABCD3P28288 659 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 PIGAP37287 484 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 MAP3K8P41279 467 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 CYB561P49447 251 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 MAN2A2P49641 1150 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 SLC7A2P52569 658 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 CRISP3P54108 245 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 CORO7P57737 925 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 MTPNP58546 118 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 PSG6Q00889 435 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 LIPEQ05469 1076 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 DUSP5Q16690 384 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF630Q2M218 657 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ARHGAP11BQ3KRB8 267 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 GPAT3Q53EU6 434 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 COX20Q5RI15 118 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 INTS11Q5TA45 600 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 BNC2Q6ZN30 1099 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 RINLQ6ZS11 566 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 NUP54Q7Z3B4 507 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 WDR53Q7Z5U6 358 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 YTHDF3Q7Z739 585 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 KRT73Q86Y46 540 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 SLC15A3Q8IY34 581 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 BCORP1Q8N888 145 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF441Q8N8Z8 693 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 CHDHQ8NE62 594 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 OR5D16Q8NGK9 328 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 PIK3R3Q92569 461 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 DIO2Q92813 273 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 CDS1Q92903 461 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 RAB8BQ92930 207 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 TMBIM1Q969X1 311 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 TMEM125Q96AQ2 219 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 MCUR1Q96AQ8 359 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 RMND5BQ96G75 393 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 REXO5Q96IC2 774 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 COL21A1Q96P44 957 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 RASL10BQ96S79 203 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF607Q96SK3 696 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 KCTD14Q9BQ13 255 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ARHGAP9Q9BRR9 750 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 UTP23Q9BRU9 249 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 SPATA5L1Q9BVQ7 753 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 NXF5Q9H1B4 397 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 LIN28AQ9H9Z2 209 aaKnown RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ZBTB20Q9HC78 741 aaPredicted RBP9.37□□□□□ -0.91
NEDD9-214ENST00000513989 A4GALTQ9NPC4 353 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 POLE3Q9NRF9 147 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 HPF1Q9NWY4 346 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 TAS2R1Q9NYW7 299 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 DTX4Q9Y2E6 619 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 PCDHGB7Q9Y5F8 929 aa9.37□□□□□ -0.91
NEDD9-214ENST00000513989 UNC79Q9P2D8 2635 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ITPR2Q14571 2701 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 A0A0G2JPF8 293 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ELOVL7A1L3X0 281 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 OR6C70A6NIJ9 312 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 TMEM200CA6NKL6 621 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 HNRNPCL2B2RXH8 293 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 HNRNPCL3B7ZW38 293 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 FXYD1O00168 92 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 MASP2O00187 686 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PRKNO60260 465 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 NME6O75414 186 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 TNFRSF21O75509 655 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 SERPINB7O75635 380 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 PPM1BO75688 479 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 DNAJC8O75937 253 aaPredicted RBP9.36□□□□□ -0.91
NEDD9-214ENST00000513989 KCNK2O95069 426 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 TFPTP0C1Z6 253 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 HNRNPCL4P0DMR1 293 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 ACP2P11117 423 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 BMP2P12643 396 aa9.36□□□□□ -0.91
NEDD9-214ENST00000513989 CPOXP36551 454 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms