RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 SPRY1O43609 319 aaPredicted RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 GCM2O75603 506 aaPredicted RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 ERAL1O75616 437 aaKnown RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 PGRP06401 933 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 KLK1P06870 262 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 FESP07332 822 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 IGHV4-31P0DP07 118 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 MTHFD2P13995 350 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 SLC25A16P16260 332 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 IGFBP5P24593 272 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 ADH6P28332 368 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 KRT20P35900 424 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 RAB10P61026 200 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 MRPS22P82650 360 aaKnown RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 MRPS35P82673 323 aaKnown RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 FASTKD3Q14CZ7 662 aaKnown RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 TAB1Q15750 504 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 TMEM44Q2T9K0 475 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 GLYR1Q49A26 553 aaPredicted RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 CYB5R2Q6BCY4 276 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 CLEC2AQ6UVW9 174 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 ATG4DQ86TL0 474 aaPredicted RBP9.76□□□□□ -0.85
DDX41-216ENST00000513562 STK32CQ86UX6 486 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 L3MBTL4Q8NA19 623 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 FBXO36Q8NEA4 188 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 KLHL29Q96CT2 875 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 ZNF681Q96N22 645 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 HDHD5Q9BXW7 423 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 PRRG4Q9BZD6 226 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 PLA2G12AQ9BZM1 189 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 NGBQ9NPG2 151 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 GLRX2Q9NS18 164 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 FAIMQ9NVQ4 179 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 MED11Q9P086 117 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 ABCG2Q9UNQ0 655 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 B3GALT5Q9Y2C3 310 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 ANGPTL3Q9Y5C1 460 aa9.76□□□□□ -0.85
DDX41-216ENST00000513562 GOLGA6L10A0A0M3HER8 536 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 SCO2O43819 266 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 FADS1O60427 444 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 LMX1BO60663 402 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 NME6O75414 186 aaPredicted RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 SIX3O95343 332 aaPredicted RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 AGTR1P30556 359 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 EIF1AXP47813 144 aaKnown RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 MAPK12P53778 367 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 ARL4CP56559 192 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 BSPH1Q075Z2 132 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 DLG1Q12959 904 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 STX5Q13190 355 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 ZNF628Q5EBL2 1059 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 CCNYL2Q5T2Q4 361 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 PPP4R4Q6NUP7 873 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 FIGNL1Q6PIW4 674 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 PAGE2Q7Z2X7 111 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 GABRG1Q8N1C3 465 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 OR52B6Q8NGF0 335 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 ZNF675Q8TD23 568 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 TRPC4APQ8TEL6 797 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 HSD17B8Q92506 261 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 EFHD2Q96C19 240 aaPredicted RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 ERP27Q96DN0 273 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 CNRIP1Q96F85 164 aaPredicted RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 ADGRG7Q96K78 797 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 ADAD1Q96M93 576 aaKnown RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 RBBP8Q99708 897 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 MRPL1Q9BYD6 325 aaKnown RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 PTGES2Q9H7Z7 377 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 ANKRA2Q9H9E1 313 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 XPR1Q9UBH6 696 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 MCTS1Q9ULC4 181 aaKnown RBP9.75□□□□□ -0.85
DDX41-216ENST00000513562 ACOT9Q9Y305 439 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 RNF11Q9Y3C5 154 aa9.75□□□□□ -0.85
DDX41-216ENST00000513562 DPRXA6NFQ7 191 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 CXorf49A8MYA2 514 aaPredicted RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 E7ESA3 106 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 EIF1AYO14602 144 aaKnown RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 GUCY1B2O75343 617 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 BCAS2O75934 225 aaPredicted RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 TUBBP07437 444 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 PIK3CGP48736 1102 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 IRX1P78414 480 aaPredicted RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 TSC22D1Q15714 1073 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 SFRP5Q5T4F7 317 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 UBAP2Q5T6F2 1119 aaKnown RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 LIPNQ5VXI9 398 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 FAM180BQ6P0A1 224 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 IL17RELQ6ZVW7 336 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 EXOC3L1Q86VI1 746 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 ZNF619Q8N2I2 560 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 METTL4Q8N3J2 472 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 SPC24Q8NBT2 197 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 OR4N2Q8NGD1 307 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 OR10D3Q8NH80 312 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 UHMK1Q8TAS1 419 aaKnown RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 PIWIL2Q8TC59 973 aaKnown RBP9.74□□□□□ -0.85
DDX41-216ENST00000513562 ACTRT1Q8TDG2 376 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 CPNE1Q99829 537 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 CACNG6Q9BXT2 260 aa9.74□□□□□ -0.85
DDX41-216ENST00000513562 POTEKPQ9BYX7 375 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms