RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 SPATA7Q9P0W8 599 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ARMCX1Q9P291 453 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 NKX1-2Q9UD57 310 aaPredicted RBP3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 STEAP1Q9UHE8 339 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 ARL5AQ9Y689 179 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 FREM1Q5H8C1 2179 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 DOCK7Q96N67 2140 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 SCN3AQ9NY46 2000 aa3.31□□□□□ -1.88
PDLIM5-218ENST00000513341 NBEAL2Q6ZNJ1 2754 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ATP6AP2A0A1C7CYW4 349 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 OR2W5A6NFC9 320 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FRG2CA6NGY1 282 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SLCO1B7G3V0H7 640 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SGK494L7N484 410 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 EPHB6O15197 1021 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 LMX1BO60663 402 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ATP6AP2O75787 350 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PROSCO94903 275 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 AGTP01019 485 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 C1QAP02745 245 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 P04436 131 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CRHP06850 196 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FHP07954 510 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FREM3P0C091 2139 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ERGP11308 486 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SRD5A1P18405 259 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CHMP24386 653 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 RBL1P28749 1068 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CCR7P32248 378 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 RPA3P35244 121 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ADRA1AP35348 466 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SSR1P43307 286 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 KLK7P49862 253 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF140P52738 457 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 TIRAPP58753 221 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 DSCR9P59020 149 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 RPS15AP62244 130 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 VLDLRP98155 873 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 LOXL1Q08397 574 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 VEZF1Q14119 521 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 TFDP2Q14188 446 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PRPSAP1Q14558 356 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 HERC3Q15034 1050 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PHKG1Q16816 387 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 MPEG1Q2M385 716 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC22A10Q63ZE4 541 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CYB5R2Q6BCY4 276 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 HIST2H2BDQ6DRA6 164 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ITPRIPL1Q6GPH6 555 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ADAM5Q6NVV9 412 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 OPN5Q6U736 354 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FAM47EQ6ZV65 393 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 KCTD20Q7Z5Y7 419 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 HSCBQ8IWL3 235 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PIANPQ8IYJ0 282 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 DND1Q8IYX4 353 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ZNF567Q8N184 647 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 LRRC25Q8N386 305 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 NKAPQ8N5F7 415 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 OR5L2Q8NGL0 311 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CFAP61Q8NHU2 1237 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 STYXQ8WUJ0 223 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 TFB1MQ8WVM0 346 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 KIAA1191Q96A73 305 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PIK3IP1Q96FE7 263 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 WFIKKN1Q96NZ8 548 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ALS2CR12Q96Q35 445 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 HIST1H2AAQ96QV6 131 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PANX3Q96QZ0 392 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FERMT1Q9BQL6 677 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 WDR83Q9BRX9 315 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 RHNO1Q9BSD3 238 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 WDR12Q9GZL7 423 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SLC25A32Q9H2D1 315 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 HAUS4Q9H6D7 363 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CHMP5Q9NZZ3 219 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 CNIH4Q9P003 139 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 C6orf203Q9P0P8 240 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 KLHL8Q9P2G9 620 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 SPRR3Q9UBC9 169 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FETUBQ9UGM5 382 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ANAPC7Q9UJX3 599 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 FBXW2Q9UKT8 454 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 TTC7AQ9ULT0 858 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 BOKQ9UMX3 212 aaPredicted RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 LIPGQ9Y5X9 500 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 BZW2Q9Y6E2 419 aaKnown RBP3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 PRSS21Q9Y6M0 314 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 ROS1P08922 2347 aa3.3□□□□□ -1.88
PDLIM5-218ENST00000513341 MED12Q93074 2177 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 KIAA1549Q9HCM3 1950 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 IGKV3D-11A0A0A0MRZ8 115 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 IGKV1-8A0A0C4DH67 115 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 TRBV11-1A0A0K0K1C0 115 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 HACD1B0YJ81 288 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 EEF1E1-BLOC1S5C9J1V9 151 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 EEF1E1O43324 174 aaKnown RBP3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 CHST10O43529 356 aa3.29□□□□□ -1.88
PDLIM5-218ENST00000513341 TCF21O43680 179 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms