RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 PAX5Q02548 391 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 UBXN1Q04323 297 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 BNIP1Q12981 228 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 MOBPQ13875 183 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 DPYSQ14117 519 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 DPYSL3Q14195 570 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 EIF2B1Q14232 305 aaKnown RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 RAB35Q15286 201 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 CMPK2Q5EBM0 449 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 ZNF789Q5FWF6 425 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 XKR4Q5GH76 650 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 SULT1C3Q6IMI6 304 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 PNCKQ6P2M8 343 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 KCTD9Q7L273 389 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 PRSS42Q7Z5A4 293 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 PARGQ86W56 976 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 SYCP3Q8IZU3 236 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 ALLCQ8N6M5 410 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 SUMF2Q8NBJ7 301 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 GOT1L1Q8NHS2 421 aaPredicted RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 ZMAT2Q96NC0 199 aaKnown RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 ZCCHC3Q9NUD5 404 aaKnown RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 STOX2Q9P2F5 926 aaPredicted RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 LHX3Q9UBR4 397 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 SWAP70Q9UH65 585 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 LCMT1Q9UIC8 334 aa1.19□□□□□ -2.22
PDGFC-208ENST00000512711 NAP1L2Q9ULW6 460 aaPredicted RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 FOXA2Q9Y261 457 aaPredicted RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 MRPS2Q9Y399 296 aaKnown RBP1.19□□□□□ -2.22
PDGFC-208ENST00000512711 SCN2AQ99250 2005 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 ASTN1O14525 1302 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 LRIT2A6NDA9 550 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 NPIPA2E9PIF3 369 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 TMX2-CTNND1H3BSU7 103 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 IMPA2O14732 288 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 ANP32DO95626 131 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 HIST1H2AGP0C0S8 130 aaPredicted RBP1.18□□□□□ -2.22
PDGFC-208ENST00000512711 ZNF823P16415 610 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 RFC2P35250 354 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 NME5P56597 212 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 MRPS11P82912 194 aaKnown RBP1.18□□□□□ -2.22
PDGFC-208ENST00000512711 YWHAHQ04917 246 aaPredicted RBP1.18□□□□□ -2.22
PDGFC-208ENST00000512711 BFSP1Q12934 665 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 UNC119Q13432 240 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 PDE7AQ13946 482 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 CYP51A1Q16850 503 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 LRRC36Q1X8D7 754 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 TMEM52BQ4KMG9 183 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 FAM120AOSQ5T036 256 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 NKAIN2Q5VXU1 208 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 HACD2Q6Y1H2 254 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 LINC00696Q6ZRV3 163 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.18□□□□□ -2.22
PDGFC-208ENST00000512711 ZNF100Q8IYN0 542 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 OR2A12Q8NGT7 310 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 TMEM37Q8WXS4 190 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 HIST1H2ACQ93077 130 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 PSMG2Q969U7 264 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 TMEM101Q96IK0 257 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 TSPYL1Q9H0U9 437 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 PNO1Q9NRX1 252 aaKnown RBP1.18□□□□□ -2.22
PDGFC-208ENST00000512711 CD274Q9NZQ7 290 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 MIOXQ9UGB7 285 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 ENTPD4Q9Y227 616 aa1.18□□□□□ -2.22
PDGFC-208ENST00000512711 LRP4O75096 1905 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 PSMB11A5LHX3 300 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 A6NDX4 124 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 DHRS7CA6NNS2 312 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 C19orf81C9J6K1 198 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 CACNB4O00305 520 aaPredicted RBP1.17□□□□□ -2.22
PDGFC-208ENST00000512711 SLC28A1O00337 649 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 CHEK1O14757 476 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 CFLARO15519 480 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 TBL1XO60907 577 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 NPIPB7O75200 414 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 BBOX1O75936 387 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 AKAP3O75969 853 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 IGHV3-48P01763 117 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 SFTPBP07988 381 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 IGFBP1P08833 259 aaPredicted RBP1.17□□□□□ -2.22
PDGFC-208ENST00000512711 IGLL1P15814 213 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 VDAC1P21796 283 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 CCNCP24863 283 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 HTR1EP28566 365 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 ADORA2BP29275 332 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 PITPNBP48739 271 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 TIMM10P62072 90 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 MADCAM1Q13477 382 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 LY6EQ16553 131 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 AANATQ16613 207 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 EOGTQ5NDL2 527 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 HIST2H2AA3Q6FI13 130 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 OR5M10Q6IEU7 315 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 LRRC31Q6UY01 552 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 DPY19L2P2Q6ZN68 376 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 BNIPLQ7Z465 357 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 GALNTL5Q7Z4T8 443 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 RANBP3LQ86VV4 465 aaPredicted RBP1.17□□□□□ -2.22
PDGFC-208ENST00000512711 PPP1R27Q86WC6 154 aa1.17□□□□□ -2.22
PDGFC-208ENST00000512711 OR8H3Q8N146 312 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms