RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 CXorf36Q9H7Y0 433 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 ANKHQ9HCJ1 492 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 PRM3Q9NNZ6 103 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 A4GALTQ9NPC4 353 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 GIN1Q9NXP7 522 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 IFT80Q9P2H3 777 aaPredicted RBP9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 TNFRSF10DQ9UBN6 386 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 EGFL7Q9UHF1 273 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 RPS6KA6Q9UK32 745 aa9.72□□□□□ -0.85
PDLIM5-217ENST00000512274 SEC16AO15027 2179 aa9.71□□□□□ -0.85
PDLIM5-217ENST00000512274 RNF103-CHMP3A0A140T963 221 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 WASHC1A8K0Z3 465 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 GSTA4O15217 222 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 BMP10O95393 424 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ONECUT2O95948 504 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 SEMG1P04279 462 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 FHP07954 510 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 GUSBP08236 651 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 CPN2P22792 545 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 FASP25445 335 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 KDELR2P33947 212 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 PRR5P85299 388 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 GK3PQ14409 553 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ATP6AP1Q15904 470 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 GCNT6Q5T4J0 391 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ZCCHC12Q6PEW1 402 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 CYP2R1Q6VVX0 501 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 CBLL1Q75N03 491 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 EIF3MQ7L2H7 374 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 PIWIL3Q7Z3Z3 882 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 IFNEQ86WN2 208 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 SPPL2CQ8IUH8 684 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF595Q8IYB9 648 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 LILRA2Q8N149 483 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 CA13Q8N1Q1 262 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 LRRC25Q8N386 305 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 HIPK4Q8NE63 616 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 OR4K14Q8NGD5 310 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 HOXB13Q92826 284 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 PMM1Q92871 262 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 EXOSC8Q96B26 276 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 CENPNQ96H22 339 aaPredicted RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 BTBD9Q96Q07 612 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 OR1F2PQ96R84 312 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 BBS4Q96RK4 519 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 LHPPQ9H008 270 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 LIME1Q9H400 295 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 PTGFRNQ9P2B2 879 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 GMPR2Q9P2T1 348 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 DHCR7Q9UBM7 475 aaKnown RBP9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF639Q9UID6 485 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 C15orf41Q9Y2V0 281 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF780BQ9Y6R6 833 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 TACC2O95359 2948 aa9.71□□□□□ -0.86
PDLIM5-217ENST00000512274 HCFC1P51610 2035 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CNTRLQ7Z7A1 2325 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 A0A0G2JN53 185 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 HYKKA2RU49 373 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 PGRMC2O15173 223 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNHIT1O43257 154 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 EMC8O43402 210 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 FOXS1O43638 330 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 PLOD3O60568 738 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 GPR75O95800 540 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 AGR2O95994 175 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 IFNA14P01570 189 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CYC1P08574 325 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 HBQ1P09105 142 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 RNH1P13489 461 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CPMP14384 443 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 FOSL1P15407 271 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 HSPA13P48723 471 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 ALDH9A1P49189 494 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CCT3P49368 545 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CLCN2P51788 898 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 ARSFP54793 590 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 SNRPNP63162 240 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 DCDP81605 110 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 PLIN5Q00G26 463 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CHRNB3Q05901 458 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 MFAP5Q13361 173 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 TBCELQ5QJ74 424 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 C18orf63Q68DL7 685 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 PATL1Q86TB9 770 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 GPR135Q8IZ08 494 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 LGI4Q8N135 537 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 OR2L13Q8N349 312 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 TTC29Q8NA56 475 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CA5BP1Q8WTZ4 195 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 FKBP10Q96AY3 582 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 SDCCAG3Q96C92 435 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 CTHRC1Q96CG8 243 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF184Q99676 751 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 MACROD1Q9BQ69 325 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 ZNF559Q9BR84 538 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 PELOQ9BRX2 385 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 KLHL4Q9C0H6 718 aa9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 SPRTNQ9H040 489 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-217ENST00000512274 C3orf14Q9HBI5 128 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms